Gene : Bradi2g00690 B. distachyon v3.1
Defline:  (1 of 1) PTHR11062:SF59 - EXOSTOSIN FAMILY PROTEIN Genomic Order:  69
Name:  ? Bradi2g00690 Secondary Identifier:  ? PAC:32777929
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-5980 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g00690 0.5kb upstream 0.5kb upstream 3702 true Bd2: 397740-401441 Brachypodium distachyon
Bradi2g00690 0.5kb upstream 0.5kb upstream 500 false Bd2: 397740-398239 Brachypodium distachyon
Bradi2g00690 0.5kb downstream 0.5kb downstream 3702 true Bd2: 398240-401941 Brachypodium distachyon
Bradi2g00690 0.5kb downstream 0.5kb downstream 500 false Bd2: 401442-401941 Brachypodium distachyon
Bradi2g00690 1.0kb upstream 1.0kb upstream 4202 true Bd2: 397240-401441 Brachypodium distachyon
Bradi2g00690 1.0kb upstream 1.0kb upstream 1000 false Bd2: 397240-398239 Brachypodium distachyon
Bradi2g00690 1.0kb downstream 1.0kb downstream 4202 true Bd2: 398240-402441 Brachypodium distachyon
Bradi2g00690 1.0kb downstream 1.0kb downstream 1000 false Bd2: 401442-402441 Brachypodium distachyon
Bradi2g00690 2.0kb upstream 2.0kb upstream 5202 true Bd2: 396240-401441 Brachypodium distachyon
Bradi2g00690 2.0kb upstream 2.0kb upstream 2000 false Bd2: 396240-398239 Brachypodium distachyon
Bradi2g00690 2.0kb downstream 2.0kb downstream 5202 true Bd2: 398240-403441 Brachypodium distachyon
Bradi2g00690 2.0kb downstream 2.0kb downstream 2000 false Bd2: 401442-403441 Brachypodium distachyon
Bradi2g00690 5.0kb upstream 5.0kb upstream 8202 true Bd2: 393240-401441 Brachypodium distachyon
Bradi2g00690 5.0kb upstream 5.0kb upstream 5000 false Bd2: 393240-398239 Brachypodium distachyon
Bradi2g00690 5.0kb downstream 5.0kb downstream 8202 true Bd2: 398240-406441 Brachypodium distachyon
Bradi2g00690 5.0kb downstream 5.0kb downstream 5000 false Bd2: 401442-406441 Brachypodium distachyon
Bradi2g00690 10.0kb upstream 10.0kb upstream 13202 true Bd2: 388240-401441 Brachypodium distachyon
Bradi2g00690 10.0kb upstream 10.0kb upstream 10000 false Bd2: 388240-398239 Brachypodium distachyon
Bradi2g00690 10.0kb downstream 10.0kb downstream 13202 true Bd2: 398240-411441 Brachypodium distachyon
Bradi2g00690 10.0kb downstream 10.0kb downstream 10000 false Bd2: 401442-411441 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573490 5269 Grass View MSA
122046187 5273 Angiosperm View MSA
121349832 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.056     Low  
cufflinks 0.123        
cufflinks 0.091     Low  
cufflinks 0.088     Low  
cufflinks 0.032     Low  
cufflinks 0.105        
cufflinks 0.077     Low  
cufflinks 0.078     Low  
cufflinks 0.095     Low  
cufflinks 0.05     Low  
cufflinks 0.01     Low Low
cufflinks 0.079     Low  
cufflinks 0.004     Low Low
cufflinks 0.001     Low Low
cufflinks 0.022     Low  
cufflinks 0.113        
cufflinks 0.054     Low  
cufflinks 0.275       High
cufflinks 0.083     Low  
cufflinks 0.037     Low  
cufflinks 0.121        
cufflinks 0.102     Low  
cufflinks 0.109        
cufflinks 0.076     Low  
cufflinks 0.088     Low  
cufflinks 0.083     Low  
cufflinks 0.004     Low Low
cufflinks 0.079     Low  
cufflinks 0.114     Low  
cufflinks 0.12     Low  

0 Strain