Gene : Bradi2g00980 B. distachyon v3.1
Defline:  (1 of 1) PTHR13586 - SCD6 PROTEIN-RELATED Genomic Order:  109
Name:  ? Bradi2g00980 Secondary Identifier:  ? PAC:32774867
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g00980 0.5kb upstream 0.5kb upstream 5392 true Bd2: 609087-614478 Brachypodium distachyon
Bradi2g00980 0.5kb upstream 0.5kb upstream 500 false Bd2: 609087-609586 Brachypodium distachyon
Bradi2g00980 0.5kb downstream 0.5kb downstream 5392 true Bd2: 609587-614978 Brachypodium distachyon
Bradi2g00980 0.5kb downstream 0.5kb downstream 500 false Bd2: 614479-614978 Brachypodium distachyon
Bradi2g00980 1.0kb upstream 1.0kb upstream 5892 true Bd2: 608587-614478 Brachypodium distachyon
Bradi2g00980 1.0kb upstream 1.0kb upstream 1000 false Bd2: 608587-609586 Brachypodium distachyon
Bradi2g00980 1.0kb downstream 1.0kb downstream 5892 true Bd2: 609587-615478 Brachypodium distachyon
Bradi2g00980 1.0kb downstream 1.0kb downstream 1000 false Bd2: 614479-615478 Brachypodium distachyon
Bradi2g00980 2.0kb upstream 2.0kb upstream 6892 true Bd2: 607587-614478 Brachypodium distachyon
Bradi2g00980 2.0kb upstream 2.0kb upstream 2000 false Bd2: 607587-609586 Brachypodium distachyon
Bradi2g00980 2.0kb downstream 2.0kb downstream 6892 true Bd2: 609587-616478 Brachypodium distachyon
Bradi2g00980 2.0kb downstream 2.0kb downstream 2000 false Bd2: 614479-616478 Brachypodium distachyon
Bradi2g00980 5.0kb upstream 5.0kb upstream 9892 true Bd2: 604587-614478 Brachypodium distachyon
Bradi2g00980 5.0kb upstream 5.0kb upstream 5000 false Bd2: 604587-609586 Brachypodium distachyon
Bradi2g00980 5.0kb downstream 5.0kb downstream 9892 true Bd2: 609587-619478 Brachypodium distachyon
Bradi2g00980 5.0kb downstream 5.0kb downstream 5000 false Bd2: 614479-619478 Brachypodium distachyon
Bradi2g00980 10.0kb upstream 10.0kb upstream 14892 true Bd2: 599587-614478 Brachypodium distachyon
Bradi2g00980 10.0kb upstream 10.0kb upstream 10000 false Bd2: 599587-609586 Brachypodium distachyon
Bradi2g00980 10.0kb downstream 10.0kb downstream 14892 true Bd2: 609587-624478 Brachypodium distachyon
Bradi2g00980 10.0kb downstream 10.0kb downstream 10000 false Bd2: 614479-624478 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576566 5269 Grass View MSA
122051702 5273 Angiosperm View MSA
121348013 5274 Embryophyte View MSA
123428687 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.887     High  
cufflinks 34.665     High  
cufflinks 36.263     High  
cufflinks 23.867     High  
cufflinks 15.454     High Low
cufflinks 32.298     High  
cufflinks 31.38     High  
cufflinks 31.749     High  
cufflinks 31.251     High  
cufflinks 18.519     High  
cufflinks 20.289     High  
cufflinks 30.337     High  
cufflinks 17.183     High  
cufflinks 16.57     High  
cufflinks 18.304     High  
cufflinks 36.633     High  
cufflinks 18.138     High  
cufflinks 57.573     High High
cufflinks 24.055     High  
cufflinks 11.562     High Low
cufflinks 25.222     High  
cufflinks 33.928     High  
cufflinks 27.91     High  
cufflinks 26.219     High  
cufflinks 23.399     High  
cufflinks 28.587     High  
cufflinks 22.7     High  
cufflinks 28.332     High  
cufflinks 28.579     High  
cufflinks 38.1     High High

0 Strain