Gene : Bradi2g01990 B. distachyon v3.1
Defline:  (1 of 1) PTHR34543:SF1 - ABSCISIC ACID (ABA)-DEFICIENT 4 PROTEIN Genomic Order:  240
Name:  ? Bradi2g01990 Secondary Identifier:  ? PAC:32779052
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g01990 0.5kb upstream 0.5kb upstream 2826 true Bd2: 1346329-1349154 Brachypodium distachyon
Bradi2g01990 0.5kb upstream 0.5kb upstream 500 false Bd2: 1348655-1349154 Brachypodium distachyon
Bradi2g01990 0.5kb downstream 0.5kb downstream 2826 true Bd2: 1345829-1348654 Brachypodium distachyon
Bradi2g01990 0.5kb downstream 0.5kb downstream 500 false Bd2: 1345829-1346328 Brachypodium distachyon
Bradi2g01990 1.0kb upstream 1.0kb upstream 3326 true Bd2: 1346329-1349654 Brachypodium distachyon
Bradi2g01990 1.0kb upstream 1.0kb upstream 1000 false Bd2: 1348655-1349654 Brachypodium distachyon
Bradi2g01990 1.0kb downstream 1.0kb downstream 3326 true Bd2: 1345329-1348654 Brachypodium distachyon
Bradi2g01990 1.0kb downstream 1.0kb downstream 1000 false Bd2: 1345329-1346328 Brachypodium distachyon
Bradi2g01990 2.0kb upstream 2.0kb upstream 4326 true Bd2: 1346329-1350654 Brachypodium distachyon
Bradi2g01990 2.0kb upstream 2.0kb upstream 2000 false Bd2: 1348655-1350654 Brachypodium distachyon
Bradi2g01990 2.0kb downstream 2.0kb downstream 4326 true Bd2: 1344329-1348654 Brachypodium distachyon
Bradi2g01990 2.0kb downstream 2.0kb downstream 2000 false Bd2: 1344329-1346328 Brachypodium distachyon
Bradi2g01990 5.0kb upstream 5.0kb upstream 7326 true Bd2: 1346329-1353654 Brachypodium distachyon
Bradi2g01990 5.0kb upstream 5.0kb upstream 5000 false Bd2: 1348655-1353654 Brachypodium distachyon
Bradi2g01990 5.0kb downstream 5.0kb downstream 7326 true Bd2: 1341329-1348654 Brachypodium distachyon
Bradi2g01990 5.0kb downstream 5.0kb downstream 5000 false Bd2: 1341329-1346328 Brachypodium distachyon
Bradi2g01990 10.0kb upstream 10.0kb upstream 12326 true Bd2: 1346329-1358654 Brachypodium distachyon
Bradi2g01990 10.0kb upstream 10.0kb upstream 10000 false Bd2: 1348655-1358654 Brachypodium distachyon
Bradi2g01990 10.0kb downstream 10.0kb downstream 12326 true Bd2: 1336329-1348654 Brachypodium distachyon
Bradi2g01990 10.0kb downstream 10.0kb downstream 10000 false Bd2: 1336329-1346328 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572330 5269 Grass View MSA
122047205 5273 Angiosperm View MSA
121346000 5274 Embryophyte View MSA
123425892 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.081        
cufflinks 7.135        
cufflinks 6.965        
cufflinks 7.923        
cufflinks 36.713     High High
cufflinks 4.708        
cufflinks 6.298        
cufflinks 4.266        
cufflinks 4.182        
cufflinks 3.958        
cufflinks 3.115        
cufflinks 3.167        
cufflinks 2.289        
cufflinks 2.78        
cufflinks 3.194        
cufflinks 4.994        
cufflinks 4.478        
cufflinks 1.88       Low
cufflinks 20.988     High High
cufflinks 76.626     High High
cufflinks 3.641        
cufflinks 4.193        
cufflinks 4.795        
cufflinks 3.917        
cufflinks 4.764        
cufflinks 6.007        
cufflinks 1.617       Low
cufflinks 5.92        
cufflinks 4.814        
cufflinks 4.561        

0 Strain