Gene : Bradi2g02590 B. distachyon v3.1
Defline:  (1 of 1) PTHR10994//PTHR10994:SF74 - RETICULON Genomic Order:  318
Name:  ? Bradi2g02590 Secondary Identifier:  ? PAC:32773095
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g02590 0.5kb upstream 0.5kb upstream 3110 true Bd2: 1719264-1722373 Brachypodium distachyon
Bradi2g02590 0.5kb upstream 0.5kb upstream 500 false Bd2: 1719264-1719763 Brachypodium distachyon
Bradi2g02590 0.5kb downstream 0.5kb downstream 3110 true Bd2: 1719764-1722873 Brachypodium distachyon
Bradi2g02590 0.5kb downstream 0.5kb downstream 500 false Bd2: 1722374-1722873 Brachypodium distachyon
Bradi2g02590 1.0kb upstream 1.0kb upstream 3610 true Bd2: 1718764-1722373 Brachypodium distachyon
Bradi2g02590 1.0kb upstream 1.0kb upstream 1000 false Bd2: 1718764-1719763 Brachypodium distachyon
Bradi2g02590 1.0kb downstream 1.0kb downstream 3610 true Bd2: 1719764-1723373 Brachypodium distachyon
Bradi2g02590 1.0kb downstream 1.0kb downstream 1000 false Bd2: 1722374-1723373 Brachypodium distachyon
Bradi2g02590 2.0kb upstream 2.0kb upstream 4610 true Bd2: 1717764-1722373 Brachypodium distachyon
Bradi2g02590 2.0kb upstream 2.0kb upstream 2000 false Bd2: 1717764-1719763 Brachypodium distachyon
Bradi2g02590 2.0kb downstream 2.0kb downstream 4610 true Bd2: 1719764-1724373 Brachypodium distachyon
Bradi2g02590 2.0kb downstream 2.0kb downstream 2000 false Bd2: 1722374-1724373 Brachypodium distachyon
Bradi2g02590 5.0kb upstream 5.0kb upstream 7610 true Bd2: 1714764-1722373 Brachypodium distachyon
Bradi2g02590 5.0kb upstream 5.0kb upstream 5000 false Bd2: 1714764-1719763 Brachypodium distachyon
Bradi2g02590 5.0kb downstream 5.0kb downstream 7610 true Bd2: 1719764-1727373 Brachypodium distachyon
Bradi2g02590 5.0kb downstream 5.0kb downstream 5000 false Bd2: 1722374-1727373 Brachypodium distachyon
Bradi2g02590 10.0kb upstream 10.0kb upstream 12610 true Bd2: 1709764-1722373 Brachypodium distachyon
Bradi2g02590 10.0kb upstream 10.0kb upstream 10000 false Bd2: 1709764-1719763 Brachypodium distachyon
Bradi2g02590 10.0kb downstream 10.0kb downstream 12610 true Bd2: 1719764-1732373 Brachypodium distachyon
Bradi2g02590 10.0kb downstream 10.0kb downstream 10000 false Bd2: 1722374-1732373 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579937 5269 Grass View MSA
122048457 5273 Angiosperm View MSA
123429002 5275 Viridiplantae View MSA
121351639 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.322        
cufflinks 1.075        
cufflinks 1.185        
cufflinks 1.192        
cufflinks 2.416        
cufflinks 0.96        
cufflinks 1.134        
cufflinks 1.114        
cufflinks 0.957        
cufflinks 1.536        
cufflinks 0.006     Low Low
cufflinks 0.904        
cufflinks 0.228        
cufflinks 0.016     Low Low
cufflinks 1.229        
cufflinks 0.98        
cufflinks 0.917        
cufflinks 2.846        
cufflinks 0.584        
cufflinks 2.028        
cufflinks 4.601       High
cufflinks 1.061        
cufflinks 1.125        
cufflinks 0.817        
cufflinks 1.223        
cufflinks 1.326        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.691        
cufflinks 1.389        
cufflinks 4.525       High

0 Strain