Gene : Bradi2g06680 B. distachyon v3.1
Defline:  (1 of 1) PTHR18968:SF6 - 2-HYDROXYACYL-COA LYASE 1 Genomic Order:  852
Name:  ? Bradi2g06680 Secondary Identifier:  ? PAC:32774880
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g06680 0.5kb upstream 0.5kb upstream 7442 true Bd2: 5128769-5136210 Brachypodium distachyon
Bradi2g06680 0.5kb upstream 0.5kb upstream 500 false Bd2: 5135711-5136210 Brachypodium distachyon
Bradi2g06680 0.5kb downstream 0.5kb downstream 7442 true Bd2: 5128269-5135710 Brachypodium distachyon
Bradi2g06680 0.5kb downstream 0.5kb downstream 500 false Bd2: 5128269-5128768 Brachypodium distachyon
Bradi2g06680 1.0kb upstream 1.0kb upstream 7942 true Bd2: 5128769-5136710 Brachypodium distachyon
Bradi2g06680 1.0kb upstream 1.0kb upstream 1000 false Bd2: 5135711-5136710 Brachypodium distachyon
Bradi2g06680 1.0kb downstream 1.0kb downstream 7942 true Bd2: 5127769-5135710 Brachypodium distachyon
Bradi2g06680 1.0kb downstream 1.0kb downstream 1000 false Bd2: 5127769-5128768 Brachypodium distachyon
Bradi2g06680 2.0kb upstream 2.0kb upstream 8942 true Bd2: 5128769-5137710 Brachypodium distachyon
Bradi2g06680 2.0kb upstream 2.0kb upstream 2000 false Bd2: 5135711-5137710 Brachypodium distachyon
Bradi2g06680 2.0kb downstream 2.0kb downstream 8942 true Bd2: 5126769-5135710 Brachypodium distachyon
Bradi2g06680 2.0kb downstream 2.0kb downstream 2000 false Bd2: 5126769-5128768 Brachypodium distachyon
Bradi2g06680 5.0kb upstream 5.0kb upstream 11942 true Bd2: 5128769-5140710 Brachypodium distachyon
Bradi2g06680 5.0kb upstream 5.0kb upstream 5000 false Bd2: 5135711-5140710 Brachypodium distachyon
Bradi2g06680 5.0kb downstream 5.0kb downstream 11942 true Bd2: 5123769-5135710 Brachypodium distachyon
Bradi2g06680 5.0kb downstream 5.0kb downstream 5000 false Bd2: 5123769-5128768 Brachypodium distachyon
Bradi2g06680 10.0kb upstream 10.0kb upstream 16942 true Bd2: 5128769-5145710 Brachypodium distachyon
Bradi2g06680 10.0kb upstream 10.0kb upstream 10000 false Bd2: 5135711-5145710 Brachypodium distachyon
Bradi2g06680 10.0kb downstream 10.0kb downstream 16942 true Bd2: 5118769-5135710 Brachypodium distachyon
Bradi2g06680 10.0kb downstream 10.0kb downstream 10000 false Bd2: 5118769-5128768 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572310 5269 Grass View MSA
122041866 5273 Angiosperm View MSA
121347920 5274 Embryophyte View MSA
123423961 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.057        
cufflinks 5.906        
cufflinks 6.115        
cufflinks 5.278        
cufflinks 4.125        
cufflinks 5.251        
cufflinks 5.749        
cufflinks 5.857        
cufflinks 5.199        
cufflinks 4.089       Low
cufflinks 5.129        
cufflinks 6.119        
cufflinks 4.67        
cufflinks 4.632        
cufflinks 5.337        
cufflinks 6.155        
cufflinks 5.252        
cufflinks 12.169     High High
cufflinks 6.735        
cufflinks 3.522       Low
cufflinks 10.986       High
cufflinks 5.326        
cufflinks 5.731        
cufflinks 5.642        
cufflinks 5.111        
cufflinks 5.737        
cufflinks 4.89        
cufflinks 5.779        
cufflinks 5.331        
cufflinks 9.198       High

0 Strain