Gene : Bradi2g11920 B. distachyon v3.1
Defline:  (1 of 2) PTHR10791:SF29 - BIDIRECTIONAL SUGAR TRANSPORTER SWEET16-RELATED Genomic Order:  1547
Name:  ? Bradi2g11920 Secondary Identifier:  ? PAC:32771944
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g11920 0.5kb upstream 0.5kb upstream 4393 true Bd2: 10244714-10249106 Brachypodium distachyon
Bradi2g11920 0.5kb upstream 0.5kb upstream 500 false Bd2: 10244714-10245213 Brachypodium distachyon
Bradi2g11920 0.5kb downstream 0.5kb downstream 4393 true Bd2: 10245214-10249606 Brachypodium distachyon
Bradi2g11920 0.5kb downstream 0.5kb downstream 500 false Bd2: 10249107-10249606 Brachypodium distachyon
Bradi2g11920 1.0kb upstream 1.0kb upstream 4893 true Bd2: 10244214-10249106 Brachypodium distachyon
Bradi2g11920 1.0kb upstream 1.0kb upstream 1000 false Bd2: 10244214-10245213 Brachypodium distachyon
Bradi2g11920 1.0kb downstream 1.0kb downstream 4893 true Bd2: 10245214-10250106 Brachypodium distachyon
Bradi2g11920 1.0kb downstream 1.0kb downstream 1000 false Bd2: 10249107-10250106 Brachypodium distachyon
Bradi2g11920 2.0kb upstream 2.0kb upstream 5893 true Bd2: 10243214-10249106 Brachypodium distachyon
Bradi2g11920 2.0kb upstream 2.0kb upstream 2000 false Bd2: 10243214-10245213 Brachypodium distachyon
Bradi2g11920 2.0kb downstream 2.0kb downstream 5893 true Bd2: 10245214-10251106 Brachypodium distachyon
Bradi2g11920 2.0kb downstream 2.0kb downstream 2000 false Bd2: 10249107-10251106 Brachypodium distachyon
Bradi2g11920 5.0kb upstream 5.0kb upstream 8893 true Bd2: 10240214-10249106 Brachypodium distachyon
Bradi2g11920 5.0kb upstream 5.0kb upstream 5000 false Bd2: 10240214-10245213 Brachypodium distachyon
Bradi2g11920 5.0kb downstream 5.0kb downstream 8893 true Bd2: 10245214-10254106 Brachypodium distachyon
Bradi2g11920 5.0kb downstream 5.0kb downstream 5000 false Bd2: 10249107-10254106 Brachypodium distachyon
Bradi2g11920 10.0kb upstream 10.0kb upstream 13893 true Bd2: 10235214-10249106 Brachypodium distachyon
Bradi2g11920 10.0kb upstream 10.0kb upstream 10000 false Bd2: 10235214-10245213 Brachypodium distachyon
Bradi2g11920 10.0kb downstream 10.0kb downstream 13893 true Bd2: 10245214-10259106 Brachypodium distachyon
Bradi2g11920 10.0kb downstream 10.0kb downstream 10000 false Bd2: 10249107-10259106 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124583216 5269 Grass View MSA
122043077 5273 Angiosperm View MSA
121350795 5274 Embryophyte View MSA
123428840 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.674        
cufflinks 9.1        
cufflinks 8.663        
cufflinks 9.437        
cufflinks 16.495     High High
cufflinks 6.788        
cufflinks 7.54        
cufflinks 6.703        
cufflinks 5.303        
cufflinks 4.282        
cufflinks 1.28       Low
cufflinks 5.72        
cufflinks 6.329        
cufflinks 1.282       Low
cufflinks 9.718     High  
cufflinks 5.988        
cufflinks 6.039        
cufflinks 14.902     High High
cufflinks 8.534        
cufflinks 3.399        
cufflinks 5.267        
cufflinks 5.096        
cufflinks 5.348        
cufflinks 6.127        
cufflinks 5.639        
cufflinks 8.487        
cufflinks 2.231       Low
cufflinks 6.935        
cufflinks 5.971        
cufflinks 10.948       High

0 Strain