Gene : Bradi2g12290 B. distachyon v3.1
Defline:  (1 of 1) PTHR23227 - BUCENTAUR RELATED Genomic Order:  1592
Name:  ? Bradi2g12290 Secondary Identifier:  ? PAC:32777820
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g12290 0.5kb upstream 0.5kb upstream 4250 true Bd2: 10639623-10643872 Brachypodium distachyon
Bradi2g12290 0.5kb upstream 0.5kb upstream 500 false Bd2: 10639623-10640122 Brachypodium distachyon
Bradi2g12290 0.5kb downstream 0.5kb downstream 4250 true Bd2: 10640123-10644372 Brachypodium distachyon
Bradi2g12290 0.5kb downstream 0.5kb downstream 500 false Bd2: 10643873-10644372 Brachypodium distachyon
Bradi2g12290 1.0kb upstream 1.0kb upstream 4750 true Bd2: 10639123-10643872 Brachypodium distachyon
Bradi2g12290 1.0kb upstream 1.0kb upstream 1000 false Bd2: 10639123-10640122 Brachypodium distachyon
Bradi2g12290 1.0kb downstream 1.0kb downstream 4750 true Bd2: 10640123-10644872 Brachypodium distachyon
Bradi2g12290 1.0kb downstream 1.0kb downstream 1000 false Bd2: 10643873-10644872 Brachypodium distachyon
Bradi2g12290 2.0kb upstream 2.0kb upstream 5750 true Bd2: 10638123-10643872 Brachypodium distachyon
Bradi2g12290 2.0kb upstream 2.0kb upstream 2000 false Bd2: 10638123-10640122 Brachypodium distachyon
Bradi2g12290 2.0kb downstream 2.0kb downstream 5750 true Bd2: 10640123-10645872 Brachypodium distachyon
Bradi2g12290 2.0kb downstream 2.0kb downstream 2000 false Bd2: 10643873-10645872 Brachypodium distachyon
Bradi2g12290 5.0kb upstream 5.0kb upstream 8750 true Bd2: 10635123-10643872 Brachypodium distachyon
Bradi2g12290 5.0kb upstream 5.0kb upstream 5000 false Bd2: 10635123-10640122 Brachypodium distachyon
Bradi2g12290 5.0kb downstream 5.0kb downstream 8750 true Bd2: 10640123-10648872 Brachypodium distachyon
Bradi2g12290 5.0kb downstream 5.0kb downstream 5000 false Bd2: 10643873-10648872 Brachypodium distachyon
Bradi2g12290 10.0kb upstream 10.0kb upstream 13750 true Bd2: 10630123-10643872 Brachypodium distachyon
Bradi2g12290 10.0kb upstream 10.0kb upstream 10000 false Bd2: 10630123-10640122 Brachypodium distachyon
Bradi2g12290 10.0kb downstream 10.0kb downstream 13750 true Bd2: 10640123-10653872 Brachypodium distachyon
Bradi2g12290 10.0kb downstream 10.0kb downstream 10000 false Bd2: 10643873-10653872 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578392 5269 Grass View MSA
122044103 5273 Angiosperm View MSA
121343963 5274 Embryophyte View MSA
123425140 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.289        
cufflinks 2.568        
cufflinks 2.432        
cufflinks 2.617        
cufflinks 2.523        
cufflinks 2.106        
cufflinks 2.009        
cufflinks 2.138        
cufflinks 2.037        
cufflinks 3.025        
cufflinks 0.973       Low
cufflinks 2.023        
cufflinks 1.059       Low
cufflinks 0.763       Low
cufflinks 2.213        
cufflinks 2.211        
cufflinks 3.154        
cufflinks 3.797       High
cufflinks 3.246        
cufflinks 2.23        
cufflinks 4.345       High
cufflinks 2.189        
cufflinks 2.121        
cufflinks 2.205        
cufflinks 2.377        
cufflinks 2.893        
cufflinks 1.028       Low
cufflinks 2.606        
cufflinks 2.22        
cufflinks 3.525       High

0 Strain