Gene : Bradi2g10220 B. distachyon v3.1
Defline:  (1 of 1) K06688 - ubiquitin-conjugating enzyme E2 C (UBE2C, UBC11) Genomic Order:  1313
Name:  ? Bradi2g10220 Secondary Identifier:  ? PAC:32782140
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-7511 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g10220 0.5kb upstream 0.5kb upstream 1799 true Bd2: 8431140-8432938 Brachypodium distachyon
Bradi2g10220 0.5kb upstream 0.5kb upstream 500 false Bd2: 8432439-8432938 Brachypodium distachyon
Bradi2g10220 0.5kb downstream 0.5kb downstream 1799 true Bd2: 8430640-8432438 Brachypodium distachyon
Bradi2g10220 0.5kb downstream 0.5kb downstream 500 false Bd2: 8430640-8431139 Brachypodium distachyon
Bradi2g10220 1.0kb upstream 1.0kb upstream 2299 true Bd2: 8431140-8433438 Brachypodium distachyon
Bradi2g10220 1.0kb upstream 1.0kb upstream 1000 false Bd2: 8432439-8433438 Brachypodium distachyon
Bradi2g10220 1.0kb downstream 1.0kb downstream 2299 true Bd2: 8430140-8432438 Brachypodium distachyon
Bradi2g10220 1.0kb downstream 1.0kb downstream 1000 false Bd2: 8430140-8431139 Brachypodium distachyon
Bradi2g10220 2.0kb upstream 2.0kb upstream 3299 true Bd2: 8431140-8434438 Brachypodium distachyon
Bradi2g10220 2.0kb upstream 2.0kb upstream 2000 false Bd2: 8432439-8434438 Brachypodium distachyon
Bradi2g10220 2.0kb downstream 2.0kb downstream 3299 true Bd2: 8429140-8432438 Brachypodium distachyon
Bradi2g10220 2.0kb downstream 2.0kb downstream 2000 false Bd2: 8429140-8431139 Brachypodium distachyon
Bradi2g10220 5.0kb upstream 5.0kb upstream 6299 true Bd2: 8431140-8437438 Brachypodium distachyon
Bradi2g10220 5.0kb upstream 5.0kb upstream 5000 false Bd2: 8432439-8437438 Brachypodium distachyon
Bradi2g10220 5.0kb downstream 5.0kb downstream 6299 true Bd2: 8426140-8432438 Brachypodium distachyon
Bradi2g10220 5.0kb downstream 5.0kb downstream 5000 false Bd2: 8426140-8431139 Brachypodium distachyon
Bradi2g10220 10.0kb upstream 10.0kb upstream 11299 true Bd2: 8431140-8442438 Brachypodium distachyon
Bradi2g10220 10.0kb upstream 10.0kb upstream 10000 false Bd2: 8432439-8442438 Brachypodium distachyon
Bradi2g10220 10.0kb downstream 10.0kb downstream 11299 true Bd2: 8421140-8432438 Brachypodium distachyon
Bradi2g10220 10.0kb downstream 10.0kb downstream 10000 false Bd2: 8421140-8431139 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124571522 5269 Grass View MSA
122046674 5273 Angiosperm View MSA
121349130 5274 Embryophyte View MSA
123424862 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.781     High  
cufflinks 27.993     High  
cufflinks 25.701     High  
cufflinks 25.524     High  
cufflinks 15.79     High  
cufflinks 22.256     High  
cufflinks 31.498     High  
cufflinks 26.25     High  
cufflinks 21.095     High  
cufflinks 28.23     High  
cufflinks 1.102       Low
cufflinks 14.481     High  
cufflinks 1.286       Low
cufflinks 1.542       Low
cufflinks 5.71        
cufflinks 24.52     High  
cufflinks 32.932     High  
cufflinks 43.208     High High
cufflinks 34.793     High  
cufflinks 1.478       Low
cufflinks 16.355     High  
cufflinks 20.204     High  
cufflinks 18.089     High  
cufflinks 15.816     High  
cufflinks 23.031     High  
cufflinks 33.011     High  
cufflinks 1.414       Low
cufflinks 29.455     High  
cufflinks 23.775     High  
cufflinks 26.168     High  

0 Strain