Gene : Bradi5g02490 B. distachyon v3.1
Defline:  (1 of 1) 2.1.1.79 - Cyclopropane-fatty-acyl-phospholipid synthase / Unsaturated-phospholipid methyltransferase Genomic Order:  279
Name:  ? Bradi5g02490 Secondary Identifier:  ? PAC:32809829
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-4942 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g02490 0.5kb upstream 0.5kb upstream 11862 true Bd5: 2670927-2682788 Brachypodium distachyon
Bradi5g02490 0.5kb upstream 0.5kb upstream 500 false Bd5: 2682289-2682788 Brachypodium distachyon
Bradi5g02490 0.5kb downstream 0.5kb downstream 11862 true Bd5: 2670427-2682288 Brachypodium distachyon
Bradi5g02490 0.5kb downstream 0.5kb downstream 500 false Bd5: 2670427-2670926 Brachypodium distachyon
Bradi5g02490 1.0kb upstream 1.0kb upstream 12362 true Bd5: 2670927-2683288 Brachypodium distachyon
Bradi5g02490 1.0kb upstream 1.0kb upstream 1000 false Bd5: 2682289-2683288 Brachypodium distachyon
Bradi5g02490 1.0kb downstream 1.0kb downstream 12362 true Bd5: 2669927-2682288 Brachypodium distachyon
Bradi5g02490 1.0kb downstream 1.0kb downstream 1000 false Bd5: 2669927-2670926 Brachypodium distachyon
Bradi5g02490 2.0kb upstream 2.0kb upstream 13362 true Bd5: 2670927-2684288 Brachypodium distachyon
Bradi5g02490 2.0kb upstream 2.0kb upstream 2000 false Bd5: 2682289-2684288 Brachypodium distachyon
Bradi5g02490 2.0kb downstream 2.0kb downstream 13362 true Bd5: 2668927-2682288 Brachypodium distachyon
Bradi5g02490 2.0kb downstream 2.0kb downstream 2000 false Bd5: 2668927-2670926 Brachypodium distachyon
Bradi5g02490 5.0kb upstream 5.0kb upstream 16362 true Bd5: 2670927-2687288 Brachypodium distachyon
Bradi5g02490 5.0kb upstream 5.0kb upstream 5000 false Bd5: 2682289-2687288 Brachypodium distachyon
Bradi5g02490 5.0kb downstream 5.0kb downstream 16362 true Bd5: 2665927-2682288 Brachypodium distachyon
Bradi5g02490 5.0kb downstream 5.0kb downstream 5000 false Bd5: 2665927-2670926 Brachypodium distachyon
Bradi5g02490 10.0kb upstream 10.0kb upstream 21362 true Bd5: 2670927-2692288 Brachypodium distachyon
Bradi5g02490 10.0kb upstream 10.0kb upstream 10000 false Bd5: 2682289-2692288 Brachypodium distachyon
Bradi5g02490 10.0kb downstream 10.0kb downstream 21362 true Bd5: 2660927-2682288 Brachypodium distachyon
Bradi5g02490 10.0kb downstream 10.0kb downstream 10000 false Bd5: 2660927-2670926 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124581502 5269 Grass View MSA
122047395 5273 Angiosperm View MSA
121346129 5274 Embryophyte View MSA
123428105 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.886        
cufflinks 11.37     High  
cufflinks 14.001     High High
cufflinks 9.832        
cufflinks 4.626        
cufflinks 10.112     High  
cufflinks 8.746        
cufflinks 8.797        
cufflinks 9.14        
cufflinks 8.772        
cufflinks 7.541        
cufflinks 10.587     High  
cufflinks 9.215     High  
cufflinks 5.9        
cufflinks 6.842        
cufflinks 10.788     High  
cufflinks 5.414        
cufflinks 0.702       Low
cufflinks 4.516        
cufflinks 1.609       Low
cufflinks 4.196        
cufflinks 14.762     High High
cufflinks 7.769        
cufflinks 8.174        
cufflinks 7.299        
cufflinks 13.956     High High
cufflinks 6.886        
cufflinks 11.763     High  
cufflinks 12.463     High  
cufflinks 8.358        

0 Strain