Gene : Bradi2g11060 B. distachyon v3.1
Defline:  (1 of 1) PTHR11071//PTHR11071:SF247 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE // PEPTIDYL-PROLYL CIS-TRANS ISOMERASE D Genomic Order:  1425
Name:  ? Bradi2g11060 Secondary Identifier:  ? PAC:32777136
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g11060 0.5kb upstream 0.5kb upstream 4639 true Bd2: 9264901-9269539 Brachypodium distachyon
Bradi2g11060 0.5kb upstream 0.5kb upstream 500 false Bd2: 9264901-9265400 Brachypodium distachyon
Bradi2g11060 0.5kb downstream 0.5kb downstream 4639 true Bd2: 9265401-9270039 Brachypodium distachyon
Bradi2g11060 0.5kb downstream 0.5kb downstream 500 false Bd2: 9269540-9270039 Brachypodium distachyon
Bradi2g11060 1.0kb upstream 1.0kb upstream 5139 true Bd2: 9264401-9269539 Brachypodium distachyon
Bradi2g11060 1.0kb upstream 1.0kb upstream 1000 false Bd2: 9264401-9265400 Brachypodium distachyon
Bradi2g11060 1.0kb downstream 1.0kb downstream 5139 true Bd2: 9265401-9270539 Brachypodium distachyon
Bradi2g11060 1.0kb downstream 1.0kb downstream 1000 false Bd2: 9269540-9270539 Brachypodium distachyon
Bradi2g11060 2.0kb upstream 2.0kb upstream 6139 true Bd2: 9263401-9269539 Brachypodium distachyon
Bradi2g11060 2.0kb upstream 2.0kb upstream 2000 false Bd2: 9263401-9265400 Brachypodium distachyon
Bradi2g11060 2.0kb downstream 2.0kb downstream 6139 true Bd2: 9265401-9271539 Brachypodium distachyon
Bradi2g11060 2.0kb downstream 2.0kb downstream 2000 false Bd2: 9269540-9271539 Brachypodium distachyon
Bradi2g11060 5.0kb upstream 5.0kb upstream 9139 true Bd2: 9260401-9269539 Brachypodium distachyon
Bradi2g11060 5.0kb upstream 5.0kb upstream 5000 false Bd2: 9260401-9265400 Brachypodium distachyon
Bradi2g11060 5.0kb downstream 5.0kb downstream 9139 true Bd2: 9265401-9274539 Brachypodium distachyon
Bradi2g11060 5.0kb downstream 5.0kb downstream 5000 false Bd2: 9269540-9274539 Brachypodium distachyon
Bradi2g11060 10.0kb upstream 10.0kb upstream 14139 true Bd2: 9255401-9269539 Brachypodium distachyon
Bradi2g11060 10.0kb upstream 10.0kb upstream 10000 false Bd2: 9255401-9265400 Brachypodium distachyon
Bradi2g11060 10.0kb downstream 10.0kb downstream 14139 true Bd2: 9265401-9279539 Brachypodium distachyon
Bradi2g11060 10.0kb downstream 10.0kb downstream 10000 false Bd2: 9269540-9279539 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573831 5269 Grass View MSA
122048638 5273 Angiosperm View MSA
123428973 5275 Viridiplantae View MSA
121349242 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.793     High  
cufflinks 21.665     High  
cufflinks 20.0     High  
cufflinks 23.22     High  
cufflinks 14.725     High  
cufflinks 16.584     High  
cufflinks 19.37     High  
cufflinks 17.331     High  
cufflinks 14.703     High  
cufflinks 33.124     High High
cufflinks 1.599       Low
cufflinks 13.687     High  
cufflinks 4.114       Low
cufflinks 2.025       Low
cufflinks 11.109     High  
cufflinks 18.844     High  
cufflinks 22.34     High  
cufflinks 4.406       Low
cufflinks 19.352     High  
cufflinks 3.493       Low
cufflinks 19.227     High  
cufflinks 22.873     High  
cufflinks 15.848     High  
cufflinks 15.16     High  
cufflinks 19.059     High  
cufflinks 25.56     High  
cufflinks 0.823       Low
cufflinks 26.279     High  
cufflinks 26.796     High  
cufflinks 24.024     High  

0 Strain