Gene : Bradi2g11490 B. distachyon v3.1
Defline:  (1 of 1) PTHR23303 - CARBOXYPEPTIDASE REGULATORY REGION-CONTAINING Genomic Order:  1490
Name:  ? Bradi2g11490 Secondary Identifier:  ? PAC:32782508
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g11490 0.5kb upstream 0.5kb upstream 14698 true Bd2: 9769296-9783993 Brachypodium distachyon
Bradi2g11490 0.5kb upstream 0.5kb upstream 500 false Bd2: 9783494-9783993 Brachypodium distachyon
Bradi2g11490 0.5kb downstream 0.5kb downstream 14698 true Bd2: 9768796-9783493 Brachypodium distachyon
Bradi2g11490 0.5kb downstream 0.5kb downstream 500 false Bd2: 9768796-9769295 Brachypodium distachyon
Bradi2g11490 1.0kb upstream 1.0kb upstream 15198 true Bd2: 9769296-9784493 Brachypodium distachyon
Bradi2g11490 1.0kb upstream 1.0kb upstream 1000 false Bd2: 9783494-9784493 Brachypodium distachyon
Bradi2g11490 1.0kb downstream 1.0kb downstream 15198 true Bd2: 9768296-9783493 Brachypodium distachyon
Bradi2g11490 1.0kb downstream 1.0kb downstream 1000 false Bd2: 9768296-9769295 Brachypodium distachyon
Bradi2g11490 2.0kb upstream 2.0kb upstream 16198 true Bd2: 9769296-9785493 Brachypodium distachyon
Bradi2g11490 2.0kb upstream 2.0kb upstream 2000 false Bd2: 9783494-9785493 Brachypodium distachyon
Bradi2g11490 2.0kb downstream 2.0kb downstream 16198 true Bd2: 9767296-9783493 Brachypodium distachyon
Bradi2g11490 2.0kb downstream 2.0kb downstream 2000 false Bd2: 9767296-9769295 Brachypodium distachyon
Bradi2g11490 5.0kb upstream 5.0kb upstream 19198 true Bd2: 9769296-9788493 Brachypodium distachyon
Bradi2g11490 5.0kb upstream 5.0kb upstream 5000 false Bd2: 9783494-9788493 Brachypodium distachyon
Bradi2g11490 5.0kb downstream 5.0kb downstream 19198 true Bd2: 9764296-9783493 Brachypodium distachyon
Bradi2g11490 5.0kb downstream 5.0kb downstream 5000 false Bd2: 9764296-9769295 Brachypodium distachyon
Bradi2g11490 10.0kb upstream 10.0kb upstream 24198 true Bd2: 9769296-9793493 Brachypodium distachyon
Bradi2g11490 10.0kb upstream 10.0kb upstream 10000 false Bd2: 9783494-9793493 Brachypodium distachyon
Bradi2g11490 10.0kb downstream 10.0kb downstream 24198 true Bd2: 9759296-9783493 Brachypodium distachyon
Bradi2g11490 10.0kb downstream 10.0kb downstream 10000 false Bd2: 9759296-9769295 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124568652 5269 Grass View MSA
122048074 5273 Angiosperm View MSA
121346415 5274 Embryophyte View MSA
123380379 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.632        
cufflinks 12.228     High  
cufflinks 10.952     High  
cufflinks 10.772     High  
cufflinks 3.238       Low
cufflinks 10.603     High  
cufflinks 9.274        
cufflinks 7.979        
cufflinks 9.744     High  
cufflinks 5.171        
cufflinks 5.121        
cufflinks 10.571     High  
cufflinks 3.789       Low
cufflinks 3.639       Low
cufflinks 4.704        
cufflinks 11.796     High  
cufflinks 7.647        
cufflinks 19.128     High High
cufflinks 8.863        
cufflinks 2.251       Low
cufflinks 8.671        
cufflinks 10.315     High  
cufflinks 7.963        
cufflinks 9.166        
cufflinks 8.791        
cufflinks 9.19        
cufflinks 4.327        
cufflinks 7.973        
cufflinks 8.526        
cufflinks 12.867     High High

0 Strain