Gene : Bradi2g16402 B. distachyon v3.1
Defline:  (1 of 1) PF04481 - Protein of unknown function (DUF561) (DUF561) Genomic Order:  2081
Name:  ? Bradi2g16402 Secondary Identifier:  ? PAC:32777168
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g16402 0.5kb upstream 0.5kb upstream 4212 true Bd2: 14449988-14454199 Brachypodium distachyon
Bradi2g16402 0.5kb upstream 0.5kb upstream 500 false Bd2: 14449988-14450487 Brachypodium distachyon
Bradi2g16402 0.5kb downstream 0.5kb downstream 4212 true Bd2: 14450488-14454699 Brachypodium distachyon
Bradi2g16402 0.5kb downstream 0.5kb downstream 500 false Bd2: 14454200-14454699 Brachypodium distachyon
Bradi2g16402 1.0kb upstream 1.0kb upstream 4712 true Bd2: 14449488-14454199 Brachypodium distachyon
Bradi2g16402 1.0kb upstream 1.0kb upstream 1000 false Bd2: 14449488-14450487 Brachypodium distachyon
Bradi2g16402 1.0kb downstream 1.0kb downstream 4712 true Bd2: 14450488-14455199 Brachypodium distachyon
Bradi2g16402 1.0kb downstream 1.0kb downstream 1000 false Bd2: 14454200-14455199 Brachypodium distachyon
Bradi2g16402 2.0kb upstream 2.0kb upstream 5712 true Bd2: 14448488-14454199 Brachypodium distachyon
Bradi2g16402 2.0kb upstream 2.0kb upstream 2000 false Bd2: 14448488-14450487 Brachypodium distachyon
Bradi2g16402 2.0kb downstream 2.0kb downstream 5712 true Bd2: 14450488-14456199 Brachypodium distachyon
Bradi2g16402 2.0kb downstream 2.0kb downstream 2000 false Bd2: 14454200-14456199 Brachypodium distachyon
Bradi2g16402 5.0kb upstream 5.0kb upstream 8712 true Bd2: 14445488-14454199 Brachypodium distachyon
Bradi2g16402 5.0kb upstream 5.0kb upstream 5000 false Bd2: 14445488-14450487 Brachypodium distachyon
Bradi2g16402 5.0kb downstream 5.0kb downstream 8712 true Bd2: 14450488-14459199 Brachypodium distachyon
Bradi2g16402 5.0kb downstream 5.0kb downstream 5000 false Bd2: 14454200-14459199 Brachypodium distachyon
Bradi2g16402 10.0kb upstream 10.0kb upstream 13712 true Bd2: 14440488-14454199 Brachypodium distachyon
Bradi2g16402 10.0kb upstream 10.0kb upstream 10000 false Bd2: 14440488-14450487 Brachypodium distachyon
Bradi2g16402 10.0kb downstream 10.0kb downstream 13712 true Bd2: 14450488-14464199 Brachypodium distachyon
Bradi2g16402 10.0kb downstream 10.0kb downstream 10000 false Bd2: 14454200-14464199 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026778 5273 Angiosperm View MSA
124578223 5269 Grass View MSA
121348425 5274 Embryophyte View MSA
123380861 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 59.123     High  
cufflinks 131.975     High High
cufflinks 92.942     High  
cufflinks 147.793     High High
cufflinks 35.812     High  
cufflinks 67.214     High  
cufflinks 99.26     High High
cufflinks 44.118     High  
cufflinks 42.376     High  
cufflinks 64.857     High  
cufflinks 17.108     High  
cufflinks 51.46     High  
cufflinks 8.731     High Low
cufflinks 9.583     High Low
cufflinks 30.123     High  
cufflinks 71.667     High  
cufflinks 48.631     High  
cufflinks 10.435       Low
cufflinks 51.989     High  
cufflinks 9.274       Low
cufflinks 50.134     High  
cufflinks 56.861     High  
cufflinks 36.602     High  
cufflinks 36.743     High  
cufflinks 68.4     High  
cufflinks 94.744     High  
cufflinks 3.855       Low
cufflinks 82.247     High  
cufflinks 74.035     High  
cufflinks 93.147     High  

0 Strain