Gene : Bradi2g16660 B. distachyon v3.1
Defline:  (1 of 2) PTHR24078//PTHR24078:SF236 - DNAJ HOMOLOG SUBFAMILY C MEMBER Genomic Order:  2113
Name:  ? Bradi2g16660 Secondary Identifier:  ? PAC:32780695
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g16660 0.5kb upstream 0.5kb upstream 2905 true Bd2: 14635738-14638642 Brachypodium distachyon
Bradi2g16660 0.5kb upstream 0.5kb upstream 500 false Bd2: 14635738-14636237 Brachypodium distachyon
Bradi2g16660 0.5kb downstream 0.5kb downstream 2905 true Bd2: 14636238-14639142 Brachypodium distachyon
Bradi2g16660 0.5kb downstream 0.5kb downstream 500 false Bd2: 14638643-14639142 Brachypodium distachyon
Bradi2g16660 1.0kb upstream 1.0kb upstream 3405 true Bd2: 14635238-14638642 Brachypodium distachyon
Bradi2g16660 1.0kb upstream 1.0kb upstream 1000 false Bd2: 14635238-14636237 Brachypodium distachyon
Bradi2g16660 1.0kb downstream 1.0kb downstream 3405 true Bd2: 14636238-14639642 Brachypodium distachyon
Bradi2g16660 1.0kb downstream 1.0kb downstream 1000 false Bd2: 14638643-14639642 Brachypodium distachyon
Bradi2g16660 2.0kb upstream 2.0kb upstream 4405 true Bd2: 14634238-14638642 Brachypodium distachyon
Bradi2g16660 2.0kb upstream 2.0kb upstream 2000 false Bd2: 14634238-14636237 Brachypodium distachyon
Bradi2g16660 2.0kb downstream 2.0kb downstream 4405 true Bd2: 14636238-14640642 Brachypodium distachyon
Bradi2g16660 2.0kb downstream 2.0kb downstream 2000 false Bd2: 14638643-14640642 Brachypodium distachyon
Bradi2g16660 5.0kb upstream 5.0kb upstream 7405 true Bd2: 14631238-14638642 Brachypodium distachyon
Bradi2g16660 5.0kb upstream 5.0kb upstream 5000 false Bd2: 14631238-14636237 Brachypodium distachyon
Bradi2g16660 5.0kb downstream 5.0kb downstream 7405 true Bd2: 14636238-14643642 Brachypodium distachyon
Bradi2g16660 5.0kb downstream 5.0kb downstream 5000 false Bd2: 14638643-14643642 Brachypodium distachyon
Bradi2g16660 10.0kb upstream 10.0kb upstream 12405 true Bd2: 14626238-14638642 Brachypodium distachyon
Bradi2g16660 10.0kb upstream 10.0kb upstream 10000 false Bd2: 14626238-14636237 Brachypodium distachyon
Bradi2g16660 10.0kb downstream 10.0kb downstream 12405 true Bd2: 14636238-14648642 Brachypodium distachyon
Bradi2g16660 10.0kb downstream 10.0kb downstream 10000 false Bd2: 14638643-14648642 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573901 5269 Grass View MSA
122043533 5273 Angiosperm View MSA
123429128 5275 Viridiplantae View MSA
121350390 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.83        
cufflinks 1.328       Low
cufflinks 1.326       Low
cufflinks 2.174        
cufflinks 31.7     High High
cufflinks 2.385        
cufflinks 1.303       Low
cufflinks 19.773     High  
cufflinks 5.348        
cufflinks 6.651        
cufflinks 16.329     High  
cufflinks 85.004     High High
cufflinks 5.585        
cufflinks 13.863     High  
cufflinks 24.309     High High
cufflinks 2.472        
cufflinks 7.719        
cufflinks 2.023        
cufflinks 10.142        
cufflinks 103.984     High High
cufflinks 3.199        
cufflinks 6.456        
cufflinks 22.629     High  
cufflinks 5.007        
cufflinks 2.585        
cufflinks 1.31       Low
cufflinks 1.735       Low
cufflinks 3.137        
cufflinks 5.649        
cufflinks 2.611        

0 Strain