Gene : Bradi2g16930 B. distachyon v3.1
Defline:  (1 of 1) KOG1685 - Uncharacterized conserved protein Genomic Order:  2156
Name:  ? Bradi2g16930 Secondary Identifier:  ? PAC:32775367
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g16930 0.5kb upstream 0.5kb upstream 2443 true Bd2: 14941059-14943501 Brachypodium distachyon
Bradi2g16930 0.5kb upstream 0.5kb upstream 500 false Bd2: 14941059-14941558 Brachypodium distachyon
Bradi2g16930 0.5kb downstream 0.5kb downstream 2443 true Bd2: 14941559-14944001 Brachypodium distachyon
Bradi2g16930 0.5kb downstream 0.5kb downstream 500 false Bd2: 14943502-14944001 Brachypodium distachyon
Bradi2g16930 1.0kb upstream 1.0kb upstream 2943 true Bd2: 14940559-14943501 Brachypodium distachyon
Bradi2g16930 1.0kb upstream 1.0kb upstream 1000 false Bd2: 14940559-14941558 Brachypodium distachyon
Bradi2g16930 1.0kb downstream 1.0kb downstream 2943 true Bd2: 14941559-14944501 Brachypodium distachyon
Bradi2g16930 1.0kb downstream 1.0kb downstream 1000 false Bd2: 14943502-14944501 Brachypodium distachyon
Bradi2g16930 2.0kb upstream 2.0kb upstream 3943 true Bd2: 14939559-14943501 Brachypodium distachyon
Bradi2g16930 2.0kb upstream 2.0kb upstream 2000 false Bd2: 14939559-14941558 Brachypodium distachyon
Bradi2g16930 2.0kb downstream 2.0kb downstream 3943 true Bd2: 14941559-14945501 Brachypodium distachyon
Bradi2g16930 2.0kb downstream 2.0kb downstream 2000 false Bd2: 14943502-14945501 Brachypodium distachyon
Bradi2g16930 5.0kb upstream 5.0kb upstream 6943 true Bd2: 14936559-14943501 Brachypodium distachyon
Bradi2g16930 5.0kb upstream 5.0kb upstream 5000 false Bd2: 14936559-14941558 Brachypodium distachyon
Bradi2g16930 5.0kb downstream 5.0kb downstream 6943 true Bd2: 14941559-14948501 Brachypodium distachyon
Bradi2g16930 5.0kb downstream 5.0kb downstream 5000 false Bd2: 14943502-14948501 Brachypodium distachyon
Bradi2g16930 10.0kb upstream 10.0kb upstream 11943 true Bd2: 14931559-14943501 Brachypodium distachyon
Bradi2g16930 10.0kb upstream 10.0kb upstream 10000 false Bd2: 14931559-14941558 Brachypodium distachyon
Bradi2g16930 10.0kb downstream 10.0kb downstream 11943 true Bd2: 14941559-14953501 Brachypodium distachyon
Bradi2g16930 10.0kb downstream 10.0kb downstream 10000 false Bd2: 14943502-14953501 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124590216 5269 Grass View MSA
122042558 5273 Angiosperm View MSA
121347008 5274 Embryophyte View MSA
123426351 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.235     High High
cufflinks 17.571     High  
cufflinks 12.722     High  
cufflinks 14.452     High  
cufflinks 6.293       Low
cufflinks 15.279     High  
cufflinks 16.219     High  
cufflinks 12.036     High  
cufflinks 13.947     High  
cufflinks 12.791     High  
cufflinks 5.443       Low
cufflinks 13.511     High  
cufflinks 4.148       Low
cufflinks 4.911       Low
cufflinks 8.195        
cufflinks 19.975     High  
cufflinks 12.973     High  
cufflinks 28.786     High High
cufflinks 10.942        
cufflinks 7.183       Low
cufflinks 17.264     High  
cufflinks 12.358     High  
cufflinks 10.868     High  
cufflinks 12.361     High  
cufflinks 15.937     High  
cufflinks 11.718     High  
cufflinks 4.76       Low
cufflinks 11.239     High  
cufflinks 13.23     High  
cufflinks 24.568     High High

0 Strain