Gene : Bradi2g17040 B. distachyon v3.1
Defline:  (1 of 2) KOG0402 - 60S ribosomal protein L37 Genomic Order:  2169
Name:  ? Bradi2g17040 Secondary Identifier:  ? PAC:32771022
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g17040 0.5kb upstream 0.5kb upstream 2736 true Bd2: 15081664-15084399 Brachypodium distachyon
Bradi2g17040 0.5kb upstream 0.5kb upstream 500 false Bd2: 15083900-15084399 Brachypodium distachyon
Bradi2g17040 0.5kb downstream 0.5kb downstream 2736 true Bd2: 15081164-15083899 Brachypodium distachyon
Bradi2g17040 0.5kb downstream 0.5kb downstream 500 false Bd2: 15081164-15081663 Brachypodium distachyon
Bradi2g17040 1.0kb upstream 1.0kb upstream 3236 true Bd2: 15081664-15084899 Brachypodium distachyon
Bradi2g17040 1.0kb upstream 1.0kb upstream 1000 false Bd2: 15083900-15084899 Brachypodium distachyon
Bradi2g17040 1.0kb downstream 1.0kb downstream 3236 true Bd2: 15080664-15083899 Brachypodium distachyon
Bradi2g17040 1.0kb downstream 1.0kb downstream 1000 false Bd2: 15080664-15081663 Brachypodium distachyon
Bradi2g17040 2.0kb upstream 2.0kb upstream 4236 true Bd2: 15081664-15085899 Brachypodium distachyon
Bradi2g17040 2.0kb upstream 2.0kb upstream 2000 false Bd2: 15083900-15085899 Brachypodium distachyon
Bradi2g17040 2.0kb downstream 2.0kb downstream 4236 true Bd2: 15079664-15083899 Brachypodium distachyon
Bradi2g17040 2.0kb downstream 2.0kb downstream 2000 false Bd2: 15079664-15081663 Brachypodium distachyon
Bradi2g17040 5.0kb upstream 5.0kb upstream 7236 true Bd2: 15081664-15088899 Brachypodium distachyon
Bradi2g17040 5.0kb upstream 5.0kb upstream 5000 false Bd2: 15083900-15088899 Brachypodium distachyon
Bradi2g17040 5.0kb downstream 5.0kb downstream 7236 true Bd2: 15076664-15083899 Brachypodium distachyon
Bradi2g17040 5.0kb downstream 5.0kb downstream 5000 false Bd2: 15076664-15081663 Brachypodium distachyon
Bradi2g17040 10.0kb upstream 10.0kb upstream 12236 true Bd2: 15081664-15093899 Brachypodium distachyon
Bradi2g17040 10.0kb upstream 10.0kb upstream 10000 false Bd2: 15083900-15093899 Brachypodium distachyon
Bradi2g17040 10.0kb downstream 10.0kb downstream 12236 true Bd2: 15071664-15083899 Brachypodium distachyon
Bradi2g17040 10.0kb downstream 10.0kb downstream 10000 false Bd2: 15071664-15081663 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124589189 5269 Grass View MSA
122042071 5273 Angiosperm View MSA
121350230 5274 Embryophyte View MSA
123426457 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 57.037     High  
cufflinks 36.23     High  
cufflinks 33.129     High  
cufflinks 48.222     High  
cufflinks 39.848     High  
cufflinks 31.14     High  
cufflinks 34.287     High  
cufflinks 25.912     High  
cufflinks 27.029     High  
cufflinks 57.368     High  
cufflinks 6.713       Low
cufflinks 24.497     High  
cufflinks 4.753       Low
cufflinks 6.409       Low
cufflinks 22.191     High  
cufflinks 32.819     High  
cufflinks 85.788     High High
cufflinks 63.366     High  
cufflinks 73.53     High High
cufflinks 38.022     High  
cufflinks 69.557     High High
cufflinks 27.47     High  
cufflinks 24.581     High  
cufflinks 26.62     High  
cufflinks 40.226     High  
cufflinks 51.703     High  
cufflinks 8.702       Low
cufflinks 43.024     High  
cufflinks 36.443     High  
cufflinks 51.345     High  

0 Strain