Gene : Bradi2g17790 B. distachyon v3.1
Defline:  (1 of 1) K06875 - programmed cell death protein 5 (PDCD5, TFAR19) Genomic Order:  2264
Name:  ? Bradi2g17790 Secondary Identifier:  ? PAC:32772894
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g17790 0.5kb upstream 0.5kb upstream 3119 true Bd2: 15829347-15832465 Brachypodium distachyon
Bradi2g17790 0.5kb upstream 0.5kb upstream 500 false Bd2: 15829347-15829846 Brachypodium distachyon
Bradi2g17790 0.5kb downstream 0.5kb downstream 3119 true Bd2: 15829847-15832965 Brachypodium distachyon
Bradi2g17790 0.5kb downstream 0.5kb downstream 500 false Bd2: 15832466-15832965 Brachypodium distachyon
Bradi2g17790 1.0kb upstream 1.0kb upstream 3619 true Bd2: 15828847-15832465 Brachypodium distachyon
Bradi2g17790 1.0kb upstream 1.0kb upstream 1000 false Bd2: 15828847-15829846 Brachypodium distachyon
Bradi2g17790 1.0kb downstream 1.0kb downstream 3619 true Bd2: 15829847-15833465 Brachypodium distachyon
Bradi2g17790 1.0kb downstream 1.0kb downstream 1000 false Bd2: 15832466-15833465 Brachypodium distachyon
Bradi2g17790 2.0kb upstream 2.0kb upstream 4619 true Bd2: 15827847-15832465 Brachypodium distachyon
Bradi2g17790 2.0kb upstream 2.0kb upstream 2000 false Bd2: 15827847-15829846 Brachypodium distachyon
Bradi2g17790 2.0kb downstream 2.0kb downstream 4619 true Bd2: 15829847-15834465 Brachypodium distachyon
Bradi2g17790 2.0kb downstream 2.0kb downstream 2000 false Bd2: 15832466-15834465 Brachypodium distachyon
Bradi2g17790 5.0kb upstream 5.0kb upstream 7619 true Bd2: 15824847-15832465 Brachypodium distachyon
Bradi2g17790 5.0kb upstream 5.0kb upstream 5000 false Bd2: 15824847-15829846 Brachypodium distachyon
Bradi2g17790 5.0kb downstream 5.0kb downstream 7619 true Bd2: 15829847-15837465 Brachypodium distachyon
Bradi2g17790 5.0kb downstream 5.0kb downstream 5000 false Bd2: 15832466-15837465 Brachypodium distachyon
Bradi2g17790 10.0kb upstream 10.0kb upstream 12619 true Bd2: 15819847-15832465 Brachypodium distachyon
Bradi2g17790 10.0kb upstream 10.0kb upstream 10000 false Bd2: 15819847-15829846 Brachypodium distachyon
Bradi2g17790 10.0kb downstream 10.0kb downstream 12619 true Bd2: 15829847-15842465 Brachypodium distachyon
Bradi2g17790 10.0kb downstream 10.0kb downstream 10000 false Bd2: 15832466-15842465 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124568316 5269 Grass View MSA
122044055 5273 Angiosperm View MSA
121343869 5274 Embryophyte View MSA
123426803 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 34.383     High  
cufflinks 36.015     High  
cufflinks 35.105     High  
cufflinks 44.15     High  
cufflinks 39.035     High  
cufflinks 30.3     High  
cufflinks 31.501     High  
cufflinks 29.26     High  
cufflinks 27.4     High Low
cufflinks 46.099     High  
cufflinks 32.829     High  
cufflinks 28.04     High Low
cufflinks 23.648     High Low
cufflinks 30.894     High  
cufflinks 32.398     High  
cufflinks 30.365     High  
cufflinks 53.0     High High
cufflinks 48.696     High  
cufflinks 59.634     High High
cufflinks 54.671     High High
cufflinks 66.806     High High
cufflinks 31.61     High  
cufflinks 27.121     High Low
cufflinks 31.153     High  
cufflinks 35.313     High  
cufflinks 50.737     High High
cufflinks 30.136     High  
cufflinks 45.757     High  
cufflinks 39.205     High  
cufflinks 43.732     High  

0 Strain