Gene : Bradi5g00880 B. distachyon v3.1
Defline:  (1 of 1) PTHR10516//PTHR10516:SF292 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE // SUBFAMILY NOT NAMED Genomic Order:  69
Name:  ? Bradi5g00880 Secondary Identifier:  ? PAC:32808584
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g00880 0.5kb upstream 0.5kb upstream 4784 true Bd5: 830614-835397 Brachypodium distachyon
Bradi5g00880 0.5kb upstream 0.5kb upstream 500 false Bd5: 830614-831113 Brachypodium distachyon
Bradi5g00880 0.5kb downstream 0.5kb downstream 4784 true Bd5: 831114-835897 Brachypodium distachyon
Bradi5g00880 0.5kb downstream 0.5kb downstream 500 false Bd5: 835398-835897 Brachypodium distachyon
Bradi5g00880 1.0kb upstream 1.0kb upstream 5284 true Bd5: 830114-835397 Brachypodium distachyon
Bradi5g00880 1.0kb upstream 1.0kb upstream 1000 false Bd5: 830114-831113 Brachypodium distachyon
Bradi5g00880 1.0kb downstream 1.0kb downstream 5284 true Bd5: 831114-836397 Brachypodium distachyon
Bradi5g00880 1.0kb downstream 1.0kb downstream 1000 false Bd5: 835398-836397 Brachypodium distachyon
Bradi5g00880 2.0kb upstream 2.0kb upstream 6284 true Bd5: 829114-835397 Brachypodium distachyon
Bradi5g00880 2.0kb upstream 2.0kb upstream 2000 false Bd5: 829114-831113 Brachypodium distachyon
Bradi5g00880 2.0kb downstream 2.0kb downstream 6284 true Bd5: 831114-837397 Brachypodium distachyon
Bradi5g00880 2.0kb downstream 2.0kb downstream 2000 false Bd5: 835398-837397 Brachypodium distachyon
Bradi5g00880 5.0kb upstream 5.0kb upstream 9284 true Bd5: 826114-835397 Brachypodium distachyon
Bradi5g00880 5.0kb upstream 5.0kb upstream 5000 false Bd5: 826114-831113 Brachypodium distachyon
Bradi5g00880 5.0kb downstream 5.0kb downstream 9284 true Bd5: 831114-840397 Brachypodium distachyon
Bradi5g00880 5.0kb downstream 5.0kb downstream 5000 false Bd5: 835398-840397 Brachypodium distachyon
Bradi5g00880 10.0kb upstream 10.0kb upstream 14284 true Bd5: 821114-835397 Brachypodium distachyon
Bradi5g00880 10.0kb upstream 10.0kb upstream 10000 false Bd5: 821114-831113 Brachypodium distachyon
Bradi5g00880 10.0kb downstream 10.0kb downstream 14284 true Bd5: 831114-845397 Brachypodium distachyon
Bradi5g00880 10.0kb downstream 10.0kb downstream 10000 false Bd5: 835398-845397 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124568645 5269 Grass View MSA
122047643 5273 Angiosperm View MSA
123428998 5275 Viridiplantae View MSA
121346019 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.765        
cufflinks 5.806        
cufflinks 6.338       High
cufflinks 6.896       High
cufflinks 4.918        
cufflinks 5.133        
cufflinks 4.846        
cufflinks 4.989        
cufflinks 4.854        
cufflinks 4.573        
cufflinks 3.956        
cufflinks 4.255        
cufflinks 2.445       Low
cufflinks 2.838       Low
cufflinks 4.587        
cufflinks 4.62        
cufflinks 5.375        
cufflinks 7.205       High
cufflinks 3.057       Low
cufflinks 4.499        
cufflinks 3.881        
cufflinks 4.922        
cufflinks 4.653        
cufflinks 4.781        
cufflinks 5.632        
cufflinks 5.828        
cufflinks 3.699       Low
cufflinks 5.333        
cufflinks 4.768        
cufflinks 4.397        

0 Strain