Gene : Bradi5g00610 B. distachyon v3.1
Defline:  (1 of 1) 2.5.1.47//4.4.1.9 - Cysteine synthase / OAS sulfhydrylase // L-3-cyanoalanine synthase / Beta-cyanoalanine synthase Genomic Order:  34
Name:  ? Bradi5g00610 Secondary Identifier:  ? PAC:32811463
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon ASPSYNII-PWY Brachypodium distachyon pathologic  
Bdistachyon CYSTSYN-PWY Brachypodium distachyon pathologic  
Bdistachyon P401-PWY Brachypodium distachyon pathologic  
Bdistachyon PWY-6936 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g00610 0.5kb upstream 0.5kb upstream 4999 true Bd5: 546956-551954 Brachypodium distachyon
Bradi5g00610 0.5kb upstream 0.5kb upstream 500 false Bd5: 551455-551954 Brachypodium distachyon
Bradi5g00610 0.5kb downstream 0.5kb downstream 4999 true Bd5: 546456-551454 Brachypodium distachyon
Bradi5g00610 0.5kb downstream 0.5kb downstream 500 false Bd5: 546456-546955 Brachypodium distachyon
Bradi5g00610 1.0kb upstream 1.0kb upstream 5499 true Bd5: 546956-552454 Brachypodium distachyon
Bradi5g00610 1.0kb upstream 1.0kb upstream 1000 false Bd5: 551455-552454 Brachypodium distachyon
Bradi5g00610 1.0kb downstream 1.0kb downstream 5499 true Bd5: 545956-551454 Brachypodium distachyon
Bradi5g00610 1.0kb downstream 1.0kb downstream 1000 false Bd5: 545956-546955 Brachypodium distachyon
Bradi5g00610 2.0kb upstream 2.0kb upstream 6499 true Bd5: 546956-553454 Brachypodium distachyon
Bradi5g00610 2.0kb upstream 2.0kb upstream 2000 false Bd5: 551455-553454 Brachypodium distachyon
Bradi5g00610 2.0kb downstream 2.0kb downstream 6499 true Bd5: 544956-551454 Brachypodium distachyon
Bradi5g00610 2.0kb downstream 2.0kb downstream 2000 false Bd5: 544956-546955 Brachypodium distachyon
Bradi5g00610 5.0kb upstream 5.0kb upstream 9499 true Bd5: 546956-556454 Brachypodium distachyon
Bradi5g00610 5.0kb upstream 5.0kb upstream 5000 false Bd5: 551455-556454 Brachypodium distachyon
Bradi5g00610 5.0kb downstream 5.0kb downstream 9499 true Bd5: 541956-551454 Brachypodium distachyon
Bradi5g00610 5.0kb downstream 5.0kb downstream 5000 false Bd5: 541956-546955 Brachypodium distachyon
Bradi5g00610 10.0kb upstream 10.0kb upstream 14499 true Bd5: 546956-561454 Brachypodium distachyon
Bradi5g00610 10.0kb upstream 10.0kb upstream 10000 false Bd5: 551455-561454 Brachypodium distachyon
Bradi5g00610 10.0kb downstream 10.0kb downstream 14499 true Bd5: 536956-551454 Brachypodium distachyon
Bradi5g00610 10.0kb downstream 10.0kb downstream 10000 false Bd5: 536956-546955 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040912 5273 Angiosperm View MSA
124580174 5269 Grass View MSA
121309765 5274 Embryophyte View MSA
123347430 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.159     High  
cufflinks 23.404     High  
cufflinks 31.775     High High
cufflinks 34.936     High High
cufflinks 21.382     High  
cufflinks 15.109     High  
cufflinks 16.261     High  
cufflinks 15.091     High  
cufflinks 14.882     High  
cufflinks 19.408     High  
cufflinks 24.588     High  
cufflinks 14.369     High  
cufflinks 13.242     High  
cufflinks 19.501     High  
cufflinks 25.349     High  
cufflinks 14.042     High  
cufflinks 20.852     High  
cufflinks 10.579       Low
cufflinks 15.997     High  
cufflinks 13.032     High Low
cufflinks 12.821     High Low
cufflinks 17.185     High  
cufflinks 15.49     High  
cufflinks 14.486     High  
cufflinks 15.476     High  
cufflinks 32.445     High High
cufflinks 14.945     High  
cufflinks 30.3     High High
cufflinks 24.047     High  
cufflinks 10.751       Low

0 Strain