Gene : Bradi4g29030 B. distachyon v3.1
Defline:  (1 of 1) PTHR10788//PTHR10788:SF19 - TREHALOSE-6-PHOSPHATE SYNTHASE // TREHALOSE-PHOSPHATE PHOSPHATASE E-RELATED Genomic Order:  3727
Name:  ? Bradi4g29030 Secondary Identifier:  ? PAC:32790164
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g29030 0.5kb upstream 0.5kb upstream 2753 true Bd4: 34347911-34350663 Brachypodium distachyon
Bradi4g29030 0.5kb upstream 0.5kb upstream 500 false Bd4: 34347911-34348410 Brachypodium distachyon
Bradi4g29030 0.5kb downstream 0.5kb downstream 2753 true Bd4: 34348411-34351163 Brachypodium distachyon
Bradi4g29030 0.5kb downstream 0.5kb downstream 500 false Bd4: 34350664-34351163 Brachypodium distachyon
Bradi4g29030 1.0kb upstream 1.0kb upstream 3253 true Bd4: 34347411-34350663 Brachypodium distachyon
Bradi4g29030 1.0kb upstream 1.0kb upstream 1000 false Bd4: 34347411-34348410 Brachypodium distachyon
Bradi4g29030 1.0kb downstream 1.0kb downstream 3253 true Bd4: 34348411-34351663 Brachypodium distachyon
Bradi4g29030 1.0kb downstream 1.0kb downstream 1000 false Bd4: 34350664-34351663 Brachypodium distachyon
Bradi4g29030 2.0kb upstream 2.0kb upstream 4253 true Bd4: 34346411-34350663 Brachypodium distachyon
Bradi4g29030 2.0kb upstream 2.0kb upstream 2000 false Bd4: 34346411-34348410 Brachypodium distachyon
Bradi4g29030 2.0kb downstream 2.0kb downstream 4253 true Bd4: 34348411-34352663 Brachypodium distachyon
Bradi4g29030 2.0kb downstream 2.0kb downstream 2000 false Bd4: 34350664-34352663 Brachypodium distachyon
Bradi4g29030 5.0kb upstream 5.0kb upstream 7253 true Bd4: 34343411-34350663 Brachypodium distachyon
Bradi4g29030 5.0kb upstream 5.0kb upstream 5000 false Bd4: 34343411-34348410 Brachypodium distachyon
Bradi4g29030 5.0kb downstream 5.0kb downstream 7253 true Bd4: 34348411-34355663 Brachypodium distachyon
Bradi4g29030 5.0kb downstream 5.0kb downstream 5000 false Bd4: 34350664-34355663 Brachypodium distachyon
Bradi4g29030 10.0kb upstream 10.0kb upstream 12253 true Bd4: 34338411-34350663 Brachypodium distachyon
Bradi4g29030 10.0kb upstream 10.0kb upstream 10000 false Bd4: 34338411-34348410 Brachypodium distachyon
Bradi4g29030 10.0kb downstream 10.0kb downstream 12253 true Bd4: 34348411-34360663 Brachypodium distachyon
Bradi4g29030 10.0kb downstream 10.0kb downstream 10000 false Bd4: 34350664-34360663 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576786 5269 Grass View MSA
122042129 5273 Angiosperm View MSA
121351669 5274 Embryophyte View MSA
123427869 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.231     High High
cufflinks 2.481        
cufflinks 1.417        
cufflinks 2.206        
cufflinks 4.192        
cufflinks 3.613        
cufflinks 3.12        
cufflinks 3.025        
cufflinks 6.19       High
cufflinks 1.247       Low
cufflinks 10.959     High High
cufflinks 4.257        
cufflinks 5.49        
cufflinks 8.492     High High
cufflinks 3.366        
cufflinks 2.908        
cufflinks 1.525        
cufflinks 3.37        
cufflinks 1.92        
cufflinks 3.462        
cufflinks 2.188        
cufflinks 1.093       Low
cufflinks 2.003        
cufflinks 5.381        
cufflinks 3.761        
cufflinks 1.092       Low
cufflinks 0.751       Low
cufflinks 1.45        
cufflinks 0.955       Low
cufflinks 3.263        

0 Strain