Gene : Bradi2g21420 B. distachyon v3.1
Defline:  (1 of 3) K07199 - 5'-AMP-activated protein kinase, regulatory beta subunit (PRKAB) Genomic Order:  2733
Name:  ? Bradi2g21420 Secondary Identifier:  ? PAC:32781551
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g21420 0.5kb upstream 0.5kb upstream 3836 true Bd2: 18777984-18781819 Brachypodium distachyon
Bradi2g21420 0.5kb upstream 0.5kb upstream 500 false Bd2: 18777984-18778483 Brachypodium distachyon
Bradi2g21420 0.5kb downstream 0.5kb downstream 3836 true Bd2: 18778484-18782319 Brachypodium distachyon
Bradi2g21420 0.5kb downstream 0.5kb downstream 500 false Bd2: 18781820-18782319 Brachypodium distachyon
Bradi2g21420 1.0kb upstream 1.0kb upstream 4336 true Bd2: 18777484-18781819 Brachypodium distachyon
Bradi2g21420 1.0kb upstream 1.0kb upstream 1000 false Bd2: 18777484-18778483 Brachypodium distachyon
Bradi2g21420 1.0kb downstream 1.0kb downstream 4336 true Bd2: 18778484-18782819 Brachypodium distachyon
Bradi2g21420 1.0kb downstream 1.0kb downstream 1000 false Bd2: 18781820-18782819 Brachypodium distachyon
Bradi2g21420 2.0kb upstream 2.0kb upstream 5336 true Bd2: 18776484-18781819 Brachypodium distachyon
Bradi2g21420 2.0kb upstream 2.0kb upstream 2000 false Bd2: 18776484-18778483 Brachypodium distachyon
Bradi2g21420 2.0kb downstream 2.0kb downstream 5336 true Bd2: 18778484-18783819 Brachypodium distachyon
Bradi2g21420 2.0kb downstream 2.0kb downstream 2000 false Bd2: 18781820-18783819 Brachypodium distachyon
Bradi2g21420 5.0kb upstream 5.0kb upstream 8336 true Bd2: 18773484-18781819 Brachypodium distachyon
Bradi2g21420 5.0kb upstream 5.0kb upstream 5000 false Bd2: 18773484-18778483 Brachypodium distachyon
Bradi2g21420 5.0kb downstream 5.0kb downstream 8336 true Bd2: 18778484-18786819 Brachypodium distachyon
Bradi2g21420 5.0kb downstream 5.0kb downstream 5000 false Bd2: 18781820-18786819 Brachypodium distachyon
Bradi2g21420 10.0kb upstream 10.0kb upstream 13336 true Bd2: 18768484-18781819 Brachypodium distachyon
Bradi2g21420 10.0kb upstream 10.0kb upstream 10000 false Bd2: 18768484-18778483 Brachypodium distachyon
Bradi2g21420 10.0kb downstream 10.0kb downstream 13336 true Bd2: 18778484-18791819 Brachypodium distachyon
Bradi2g21420 10.0kb downstream 10.0kb downstream 10000 false Bd2: 18781820-18791819 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124571028 5269 Grass View MSA
122041753 5273 Angiosperm View MSA
121345261 5274 Embryophyte View MSA
123426874 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.586       Low
cufflinks 6.979        
cufflinks 24.521     High  
cufflinks 4.374       Low
cufflinks 31.414     High High
cufflinks 7.35        
cufflinks 9.131        
cufflinks 3.878       Low
cufflinks 4.677       Low
cufflinks 23.582     High  
cufflinks 33.527     High High
cufflinks 7.932        
cufflinks 23.044     High  
cufflinks 14.753     High  
cufflinks 3.332       Low
cufflinks 13.681     High  
cufflinks 8.177        
cufflinks 24.399     High  
cufflinks 23.824     High  
cufflinks 43.607     High High
cufflinks 10.653        
cufflinks 15.298     High  
cufflinks 3.333       Low
cufflinks 3.164       Low
cufflinks 5.224       Low
cufflinks 26.058     High  
cufflinks 13.678     High  
cufflinks 25.303     High  
cufflinks 16.48     High  
cufflinks 13.748     High  

0 Strain