Gene : Bradi2g22227 B. distachyon v3.1
Defline:  (1 of 56) PF03101//PF10551 - FAR1 DNA-binding domain (FAR1) // MULE transposase domain (MULE) Genomic Order:  2812
Name:  ? Bradi2g22227 Secondary Identifier:  ? PAC:32781641
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g22227 0.5kb upstream 0.5kb upstream 3596 true Bd2: 19741811-19745406 Brachypodium distachyon
Bradi2g22227 0.5kb upstream 0.5kb upstream 500 false Bd2: 19741811-19742310 Brachypodium distachyon
Bradi2g22227 0.5kb downstream 0.5kb downstream 3596 true Bd2: 19742311-19745906 Brachypodium distachyon
Bradi2g22227 0.5kb downstream 0.5kb downstream 500 false Bd2: 19745407-19745906 Brachypodium distachyon
Bradi2g22227 1.0kb upstream 1.0kb upstream 4096 true Bd2: 19741311-19745406 Brachypodium distachyon
Bradi2g22227 1.0kb upstream 1.0kb upstream 1000 false Bd2: 19741311-19742310 Brachypodium distachyon
Bradi2g22227 1.0kb downstream 1.0kb downstream 4096 true Bd2: 19742311-19746406 Brachypodium distachyon
Bradi2g22227 1.0kb downstream 1.0kb downstream 1000 false Bd2: 19745407-19746406 Brachypodium distachyon
Bradi2g22227 2.0kb upstream 2.0kb upstream 5096 true Bd2: 19740311-19745406 Brachypodium distachyon
Bradi2g22227 2.0kb upstream 2.0kb upstream 2000 false Bd2: 19740311-19742310 Brachypodium distachyon
Bradi2g22227 2.0kb downstream 2.0kb downstream 5096 true Bd2: 19742311-19747406 Brachypodium distachyon
Bradi2g22227 2.0kb downstream 2.0kb downstream 2000 false Bd2: 19745407-19747406 Brachypodium distachyon
Bradi2g22227 5.0kb upstream 5.0kb upstream 8096 true Bd2: 19737311-19745406 Brachypodium distachyon
Bradi2g22227 5.0kb upstream 5.0kb upstream 5000 false Bd2: 19737311-19742310 Brachypodium distachyon
Bradi2g22227 5.0kb downstream 5.0kb downstream 8096 true Bd2: 19742311-19750406 Brachypodium distachyon
Bradi2g22227 5.0kb downstream 5.0kb downstream 5000 false Bd2: 19745407-19750406 Brachypodium distachyon
Bradi2g22227 10.0kb upstream 10.0kb upstream 13096 true Bd2: 19732311-19745406 Brachypodium distachyon
Bradi2g22227 10.0kb upstream 10.0kb upstream 10000 false Bd2: 19732311-19742310 Brachypodium distachyon
Bradi2g22227 10.0kb downstream 10.0kb downstream 13096 true Bd2: 19742311-19755406 Brachypodium distachyon
Bradi2g22227 10.0kb downstream 10.0kb downstream 10000 false Bd2: 19745407-19755406 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122031606 5273 Angiosperm View MSA
124589040 5269 Grass View MSA
121300621 5274 Embryophyte View MSA
123338368 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain