Gene : Bradi2g22770 B. distachyon v3.1
Defline:  (1 of 1) PTHR12210//PTHR12210:SF72 - NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED // SUBFAMILY NOT NAMED Genomic Order:  2881
Name:  ? Bradi2g22770 Secondary Identifier:  ? PAC:32773233
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g22770 0.5kb upstream 0.5kb upstream 2575 true Bd2: 20277126-20279700 Brachypodium distachyon
Bradi2g22770 0.5kb upstream 0.5kb upstream 500 false Bd2: 20279201-20279700 Brachypodium distachyon
Bradi2g22770 0.5kb downstream 0.5kb downstream 2575 true Bd2: 20276626-20279200 Brachypodium distachyon
Bradi2g22770 0.5kb downstream 0.5kb downstream 500 false Bd2: 20276626-20277125 Brachypodium distachyon
Bradi2g22770 1.0kb upstream 1.0kb upstream 3075 true Bd2: 20277126-20280200 Brachypodium distachyon
Bradi2g22770 1.0kb upstream 1.0kb upstream 1000 false Bd2: 20279201-20280200 Brachypodium distachyon
Bradi2g22770 1.0kb downstream 1.0kb downstream 3075 true Bd2: 20276126-20279200 Brachypodium distachyon
Bradi2g22770 1.0kb downstream 1.0kb downstream 1000 false Bd2: 20276126-20277125 Brachypodium distachyon
Bradi2g22770 2.0kb upstream 2.0kb upstream 4075 true Bd2: 20277126-20281200 Brachypodium distachyon
Bradi2g22770 2.0kb upstream 2.0kb upstream 2000 false Bd2: 20279201-20281200 Brachypodium distachyon
Bradi2g22770 2.0kb downstream 2.0kb downstream 4075 true Bd2: 20275126-20279200 Brachypodium distachyon
Bradi2g22770 2.0kb downstream 2.0kb downstream 2000 false Bd2: 20275126-20277125 Brachypodium distachyon
Bradi2g22770 5.0kb upstream 5.0kb upstream 7075 true Bd2: 20277126-20284200 Brachypodium distachyon
Bradi2g22770 5.0kb upstream 5.0kb upstream 5000 false Bd2: 20279201-20284200 Brachypodium distachyon
Bradi2g22770 5.0kb downstream 5.0kb downstream 7075 true Bd2: 20272126-20279200 Brachypodium distachyon
Bradi2g22770 5.0kb downstream 5.0kb downstream 5000 false Bd2: 20272126-20277125 Brachypodium distachyon
Bradi2g22770 10.0kb upstream 10.0kb upstream 12075 true Bd2: 20277126-20289200 Brachypodium distachyon
Bradi2g22770 10.0kb upstream 10.0kb upstream 10000 false Bd2: 20279201-20289200 Brachypodium distachyon
Bradi2g22770 10.0kb downstream 10.0kb downstream 12075 true Bd2: 20267126-20279200 Brachypodium distachyon
Bradi2g22770 10.0kb downstream 10.0kb downstream 10000 false Bd2: 20267126-20277125 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582186 5269 Grass View MSA
122050524 5273 Angiosperm View MSA
123429149 5275 Viridiplantae View MSA
121311967 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.982        
cufflinks 1.869        
cufflinks 1.783        
cufflinks 2.174        
cufflinks 1.788        
cufflinks 1.427        
cufflinks 1.779        
cufflinks 1.39        
cufflinks 1.276        
cufflinks 2.023        
cufflinks 1.756        
cufflinks 1.026       Low
cufflinks 1.216        
cufflinks 1.269        
cufflinks 1.496        
cufflinks 1.348        
cufflinks 1.562        
cufflinks 4.151       High
cufflinks 5.376       High
cufflinks 4.01       High
cufflinks 2.101        
cufflinks 1.893        
cufflinks 1.223        
cufflinks 0.879       Low
cufflinks 1.187        
cufflinks 3.464       High
cufflinks 3.245        
cufflinks 2.581        
cufflinks 2.38        
cufflinks 1.133       Low

0 Strain