Gene : Bradi4g28300 B. distachyon v3.1
Defline:  (1 of 1) 2.8.1.6//2.8.1.7 - Biotin synthase // Cysteine desulfurase / Cysteine desulfurylase Genomic Order:  3614
Name:  ? Bradi4g28300 Secondary Identifier:  ? PAC:32787770
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY0-1021 Brachypodium distachyon pathologic  
Bdistachyon PWY0-1507 Brachypodium distachyon pathologic  
Bdistachyon PWY-6823 Brachypodium distachyon pathologic  
Bdistachyon PWY-7250 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g28300 0.5kb upstream 0.5kb upstream 4114 true Bd4: 33544613-33548726 Brachypodium distachyon
Bradi4g28300 0.5kb upstream 0.5kb upstream 500 false Bd4: 33544613-33545112 Brachypodium distachyon
Bradi4g28300 0.5kb downstream 0.5kb downstream 4114 true Bd4: 33545113-33549226 Brachypodium distachyon
Bradi4g28300 0.5kb downstream 0.5kb downstream 500 false Bd4: 33548727-33549226 Brachypodium distachyon
Bradi4g28300 1.0kb upstream 1.0kb upstream 4614 true Bd4: 33544113-33548726 Brachypodium distachyon
Bradi4g28300 1.0kb upstream 1.0kb upstream 1000 false Bd4: 33544113-33545112 Brachypodium distachyon
Bradi4g28300 1.0kb downstream 1.0kb downstream 4614 true Bd4: 33545113-33549726 Brachypodium distachyon
Bradi4g28300 1.0kb downstream 1.0kb downstream 1000 false Bd4: 33548727-33549726 Brachypodium distachyon
Bradi4g28300 2.0kb upstream 2.0kb upstream 5614 true Bd4: 33543113-33548726 Brachypodium distachyon
Bradi4g28300 2.0kb upstream 2.0kb upstream 2000 false Bd4: 33543113-33545112 Brachypodium distachyon
Bradi4g28300 2.0kb downstream 2.0kb downstream 5614 true Bd4: 33545113-33550726 Brachypodium distachyon
Bradi4g28300 2.0kb downstream 2.0kb downstream 2000 false Bd4: 33548727-33550726 Brachypodium distachyon
Bradi4g28300 5.0kb upstream 5.0kb upstream 8614 true Bd4: 33540113-33548726 Brachypodium distachyon
Bradi4g28300 5.0kb upstream 5.0kb upstream 5000 false Bd4: 33540113-33545112 Brachypodium distachyon
Bradi4g28300 5.0kb downstream 5.0kb downstream 8614 true Bd4: 33545113-33553726 Brachypodium distachyon
Bradi4g28300 5.0kb downstream 5.0kb downstream 5000 false Bd4: 33548727-33553726 Brachypodium distachyon
Bradi4g28300 10.0kb upstream 10.0kb upstream 13614 true Bd4: 33535113-33548726 Brachypodium distachyon
Bradi4g28300 10.0kb upstream 10.0kb upstream 10000 false Bd4: 33535113-33545112 Brachypodium distachyon
Bradi4g28300 10.0kb downstream 10.0kb downstream 13614 true Bd4: 33545113-33558726 Brachypodium distachyon
Bradi4g28300 10.0kb downstream 10.0kb downstream 10000 false Bd4: 33548727-33558726 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572398 5269 Grass View MSA
122047383 5273 Angiosperm View MSA
121345399 5274 Embryophyte View MSA
123425014 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.184     High  
cufflinks 11.795     High  
cufflinks 9.933        
cufflinks 10.982     High  
cufflinks 20.268     High High
cufflinks 9.672     High  
cufflinks 11.093     High  
cufflinks 10.878     High  
cufflinks 9.046        
cufflinks 8.71        
cufflinks 12.503     High  
cufflinks 8.67        
cufflinks 9.289     High  
cufflinks 9.515     High  
cufflinks 10.344     High  
cufflinks 10.452     High  
cufflinks 8.295        
cufflinks 12.261     High  
cufflinks 26.771     High High
cufflinks 107.591     High High
cufflinks 11.005        
cufflinks 8.598        
cufflinks 10.998     High  
cufflinks 8.55        
cufflinks 8.517        
cufflinks 10.134        
cufflinks 9.843     High  
cufflinks 9.941        
cufflinks 9.876        
cufflinks 9.228        

0 Strain