Gene : Bradi4g28380 B. distachyon v3.1
Defline:  (1 of 1) PTHR20275:SF2 - NADH KINASE Genomic Order:  3632
Name:  ? Bradi4g28380 Secondary Identifier:  ? PAC:32791159
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-5083 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g28380 0.5kb upstream 0.5kb upstream 3663 true Bd4: 33674806-33678468 Brachypodium distachyon
Bradi4g28380 0.5kb upstream 0.5kb upstream 500 false Bd4: 33677969-33678468 Brachypodium distachyon
Bradi4g28380 0.5kb downstream 0.5kb downstream 3663 true Bd4: 33674306-33677968 Brachypodium distachyon
Bradi4g28380 0.5kb downstream 0.5kb downstream 500 false Bd4: 33674306-33674805 Brachypodium distachyon
Bradi4g28380 1.0kb upstream 1.0kb upstream 4163 true Bd4: 33674806-33678968 Brachypodium distachyon
Bradi4g28380 1.0kb upstream 1.0kb upstream 1000 false Bd4: 33677969-33678968 Brachypodium distachyon
Bradi4g28380 1.0kb downstream 1.0kb downstream 4163 true Bd4: 33673806-33677968 Brachypodium distachyon
Bradi4g28380 1.0kb downstream 1.0kb downstream 1000 false Bd4: 33673806-33674805 Brachypodium distachyon
Bradi4g28380 2.0kb upstream 2.0kb upstream 5163 true Bd4: 33674806-33679968 Brachypodium distachyon
Bradi4g28380 2.0kb upstream 2.0kb upstream 2000 false Bd4: 33677969-33679968 Brachypodium distachyon
Bradi4g28380 2.0kb downstream 2.0kb downstream 5163 true Bd4: 33672806-33677968 Brachypodium distachyon
Bradi4g28380 2.0kb downstream 2.0kb downstream 2000 false Bd4: 33672806-33674805 Brachypodium distachyon
Bradi4g28380 5.0kb upstream 5.0kb upstream 8163 true Bd4: 33674806-33682968 Brachypodium distachyon
Bradi4g28380 5.0kb upstream 5.0kb upstream 5000 false Bd4: 33677969-33682968 Brachypodium distachyon
Bradi4g28380 5.0kb downstream 5.0kb downstream 8163 true Bd4: 33669806-33677968 Brachypodium distachyon
Bradi4g28380 5.0kb downstream 5.0kb downstream 5000 false Bd4: 33669806-33674805 Brachypodium distachyon
Bradi4g28380 10.0kb upstream 10.0kb upstream 13163 true Bd4: 33674806-33687968 Brachypodium distachyon
Bradi4g28380 10.0kb upstream 10.0kb upstream 10000 false Bd4: 33677969-33687968 Brachypodium distachyon
Bradi4g28380 10.0kb downstream 10.0kb downstream 13163 true Bd4: 33664806-33677968 Brachypodium distachyon
Bradi4g28380 10.0kb downstream 10.0kb downstream 10000 false Bd4: 33664806-33674805 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579122 5269 Grass View MSA
122049268 5273 Angiosperm View MSA
121346179 5274 Embryophyte View MSA
123425212 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.383        
cufflinks 1.091       High
cufflinks 0.768        
cufflinks 1.086       High
cufflinks 0.437        
cufflinks 0.554        
cufflinks 0.795        
cufflinks 0.408        
cufflinks 0.427        
cufflinks 0.514        
cufflinks 0.277       Low
cufflinks 0.318        
cufflinks 0.166       Low
cufflinks 0.197       Low
cufflinks 0.264       Low
cufflinks 0.494        
cufflinks 0.424        
cufflinks 0.839        
cufflinks 1.367       High
cufflinks 1.495       High
cufflinks 0.728        
cufflinks 0.425        
cufflinks 0.377        
cufflinks 0.36        
cufflinks 0.713        
cufflinks 0.801        
cufflinks 0.217       Low
cufflinks 0.513        
cufflinks 0.452        
cufflinks 0.743        

0 Strain