Gene : Bradi2g20190 B. distachyon v3.1
Defline:  (1 of 1) PTHR12303:SF6 - UPF0586 PROTEIN C9ORF41 Genomic Order:  2573
Name:  ? Bradi2g20190 Secondary Identifier:  ? PAC:32776436
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g20190 0.5kb upstream 0.5kb upstream 10086 true Bd2: 17710538-17720623 Brachypodium distachyon
Bradi2g20190 0.5kb upstream 0.5kb upstream 500 false Bd2: 17720124-17720623 Brachypodium distachyon
Bradi2g20190 0.5kb downstream 0.5kb downstream 10086 true Bd2: 17710038-17720123 Brachypodium distachyon
Bradi2g20190 0.5kb downstream 0.5kb downstream 500 false Bd2: 17710038-17710537 Brachypodium distachyon
Bradi2g20190 1.0kb upstream 1.0kb upstream 10586 true Bd2: 17710538-17721123 Brachypodium distachyon
Bradi2g20190 1.0kb upstream 1.0kb upstream 1000 false Bd2: 17720124-17721123 Brachypodium distachyon
Bradi2g20190 1.0kb downstream 1.0kb downstream 10586 true Bd2: 17709538-17720123 Brachypodium distachyon
Bradi2g20190 1.0kb downstream 1.0kb downstream 1000 false Bd2: 17709538-17710537 Brachypodium distachyon
Bradi2g20190 2.0kb upstream 2.0kb upstream 11586 true Bd2: 17710538-17722123 Brachypodium distachyon
Bradi2g20190 2.0kb upstream 2.0kb upstream 2000 false Bd2: 17720124-17722123 Brachypodium distachyon
Bradi2g20190 2.0kb downstream 2.0kb downstream 11586 true Bd2: 17708538-17720123 Brachypodium distachyon
Bradi2g20190 2.0kb downstream 2.0kb downstream 2000 false Bd2: 17708538-17710537 Brachypodium distachyon
Bradi2g20190 5.0kb upstream 5.0kb upstream 14586 true Bd2: 17710538-17725123 Brachypodium distachyon
Bradi2g20190 5.0kb upstream 5.0kb upstream 5000 false Bd2: 17720124-17725123 Brachypodium distachyon
Bradi2g20190 5.0kb downstream 5.0kb downstream 14586 true Bd2: 17705538-17720123 Brachypodium distachyon
Bradi2g20190 5.0kb downstream 5.0kb downstream 5000 false Bd2: 17705538-17710537 Brachypodium distachyon
Bradi2g20190 10.0kb upstream 10.0kb upstream 19586 true Bd2: 17710538-17730123 Brachypodium distachyon
Bradi2g20190 10.0kb upstream 10.0kb upstream 10000 false Bd2: 17720124-17730123 Brachypodium distachyon
Bradi2g20190 10.0kb downstream 10.0kb downstream 19586 true Bd2: 17700538-17720123 Brachypodium distachyon
Bradi2g20190 10.0kb downstream 10.0kb downstream 10000 false Bd2: 17700538-17710537 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574379 5269 Grass View MSA
122046455 5273 Angiosperm View MSA
121344322 5274 Embryophyte View MSA
123425361 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.804       Low
cufflinks 2.978        
cufflinks 3.381       High
cufflinks 2.537        
cufflinks 1.703       Low
cufflinks 2.612        
cufflinks 2.388        
cufflinks 2.126        
cufflinks 2.621        
cufflinks 2.818        
cufflinks 3.745       High
cufflinks 2.301        
cufflinks 2.129        
cufflinks 2.632        
cufflinks 1.845       Low
cufflinks 2.808        
cufflinks 1.912        
cufflinks 3.452       High
cufflinks 1.85       Low
cufflinks 1.818       Low
cufflinks 2.488        
cufflinks 3.384       High
cufflinks 2.141        
cufflinks 2.323        
cufflinks 2.7        
cufflinks 3.37       High
cufflinks 3.096        
cufflinks 3.473       High
cufflinks 3.299       High
cufflinks 2.263        

0 Strain