Gene : Bradi4g28800 B. distachyon v3.1
Defline:  (1 of 1) PTHR31846:SF7 - CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN Genomic Order:  3692
Name:  ? Bradi4g28800 Secondary Identifier:  ? PAC:32791737
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g28800 0.5kb upstream 0.5kb upstream 7774 true Bd4: 34108534-34116307 Brachypodium distachyon
Bradi4g28800 0.5kb upstream 0.5kb upstream 500 false Bd4: 34108534-34109033 Brachypodium distachyon
Bradi4g28800 0.5kb downstream 0.5kb downstream 7774 true Bd4: 34109034-34116807 Brachypodium distachyon
Bradi4g28800 0.5kb downstream 0.5kb downstream 500 false Bd4: 34116308-34116807 Brachypodium distachyon
Bradi4g28800 1.0kb upstream 1.0kb upstream 8274 true Bd4: 34108034-34116307 Brachypodium distachyon
Bradi4g28800 1.0kb upstream 1.0kb upstream 1000 false Bd4: 34108034-34109033 Brachypodium distachyon
Bradi4g28800 1.0kb downstream 1.0kb downstream 8274 true Bd4: 34109034-34117307 Brachypodium distachyon
Bradi4g28800 1.0kb downstream 1.0kb downstream 1000 false Bd4: 34116308-34117307 Brachypodium distachyon
Bradi4g28800 2.0kb upstream 2.0kb upstream 9274 true Bd4: 34107034-34116307 Brachypodium distachyon
Bradi4g28800 2.0kb upstream 2.0kb upstream 2000 false Bd4: 34107034-34109033 Brachypodium distachyon
Bradi4g28800 2.0kb downstream 2.0kb downstream 9274 true Bd4: 34109034-34118307 Brachypodium distachyon
Bradi4g28800 2.0kb downstream 2.0kb downstream 2000 false Bd4: 34116308-34118307 Brachypodium distachyon
Bradi4g28800 5.0kb upstream 5.0kb upstream 12274 true Bd4: 34104034-34116307 Brachypodium distachyon
Bradi4g28800 5.0kb upstream 5.0kb upstream 5000 false Bd4: 34104034-34109033 Brachypodium distachyon
Bradi4g28800 5.0kb downstream 5.0kb downstream 12274 true Bd4: 34109034-34121307 Brachypodium distachyon
Bradi4g28800 5.0kb downstream 5.0kb downstream 5000 false Bd4: 34116308-34121307 Brachypodium distachyon
Bradi4g28800 10.0kb upstream 10.0kb upstream 17274 true Bd4: 34099034-34116307 Brachypodium distachyon
Bradi4g28800 10.0kb upstream 10.0kb upstream 10000 false Bd4: 34099034-34109033 Brachypodium distachyon
Bradi4g28800 10.0kb downstream 10.0kb downstream 17274 true Bd4: 34109034-34126307 Brachypodium distachyon
Bradi4g28800 10.0kb downstream 10.0kb downstream 10000 false Bd4: 34116308-34126307 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573752 5269 Grass View MSA
122041711 5273 Angiosperm View MSA
121349891 5274 Embryophyte View MSA
123381486 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.962        
cufflinks 11.834     High High
cufflinks 10.726     High High
cufflinks 9.67        
cufflinks 2.501       Low
cufflinks 9.229        
cufflinks 9.674     High  
cufflinks 6.136        
cufflinks 7.928        
cufflinks 4.793        
cufflinks 8.51        
cufflinks 8.634        
cufflinks 4.846        
cufflinks 5.266        
cufflinks 4.08        
cufflinks 10.536     High High
cufflinks 3.712        
cufflinks 2.034       Low
cufflinks 2.79       Low
cufflinks 1.447       Low
cufflinks 3.23        
cufflinks 8.383        
cufflinks 5.848        
cufflinks 6.176        
cufflinks 7.674        
cufflinks 7.974        
cufflinks 4.031        
cufflinks 6.319        
cufflinks 6.68        
cufflinks 8.48        

0 Strain