Gene : Bradi2g20340 B. distachyon v3.1
Defline:  (1 of 5) 3.6.5.4 - Signal-recognition-particle GTPase Genomic Order:  2589
Name:  ? Bradi2g20340 Secondary Identifier:  ? PAC:32777615
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g20340 0.5kb upstream 0.5kb upstream 4308 true Bd2: 17856134-17860441 Brachypodium distachyon
Bradi2g20340 0.5kb upstream 0.5kb upstream 500 false Bd2: 17856134-17856633 Brachypodium distachyon
Bradi2g20340 0.5kb downstream 0.5kb downstream 4308 true Bd2: 17856634-17860941 Brachypodium distachyon
Bradi2g20340 0.5kb downstream 0.5kb downstream 500 false Bd2: 17860442-17860941 Brachypodium distachyon
Bradi2g20340 1.0kb upstream 1.0kb upstream 4808 true Bd2: 17855634-17860441 Brachypodium distachyon
Bradi2g20340 1.0kb upstream 1.0kb upstream 1000 false Bd2: 17855634-17856633 Brachypodium distachyon
Bradi2g20340 1.0kb downstream 1.0kb downstream 4808 true Bd2: 17856634-17861441 Brachypodium distachyon
Bradi2g20340 1.0kb downstream 1.0kb downstream 1000 false Bd2: 17860442-17861441 Brachypodium distachyon
Bradi2g20340 2.0kb upstream 2.0kb upstream 5808 true Bd2: 17854634-17860441 Brachypodium distachyon
Bradi2g20340 2.0kb upstream 2.0kb upstream 2000 false Bd2: 17854634-17856633 Brachypodium distachyon
Bradi2g20340 2.0kb downstream 2.0kb downstream 5808 true Bd2: 17856634-17862441 Brachypodium distachyon
Bradi2g20340 2.0kb downstream 2.0kb downstream 2000 false Bd2: 17860442-17862441 Brachypodium distachyon
Bradi2g20340 5.0kb upstream 5.0kb upstream 8808 true Bd2: 17851634-17860441 Brachypodium distachyon
Bradi2g20340 5.0kb upstream 5.0kb upstream 5000 false Bd2: 17851634-17856633 Brachypodium distachyon
Bradi2g20340 5.0kb downstream 5.0kb downstream 8808 true Bd2: 17856634-17865441 Brachypodium distachyon
Bradi2g20340 5.0kb downstream 5.0kb downstream 5000 false Bd2: 17860442-17865441 Brachypodium distachyon
Bradi2g20340 10.0kb upstream 10.0kb upstream 13808 true Bd2: 17846634-17860441 Brachypodium distachyon
Bradi2g20340 10.0kb upstream 10.0kb upstream 10000 false Bd2: 17846634-17856633 Brachypodium distachyon
Bradi2g20340 10.0kb downstream 10.0kb downstream 13808 true Bd2: 17856634-17870441 Brachypodium distachyon
Bradi2g20340 10.0kb downstream 10.0kb downstream 10000 false Bd2: 17860442-17870441 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124586778 5269 Grass View MSA
122048939 5273 Angiosperm View MSA
121348760 5274 Embryophyte View MSA
123426502 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.344     High  
cufflinks 17.693     High  
cufflinks 19.627     High  
cufflinks 15.62     High  
cufflinks 17.89     High  
cufflinks 17.602     High  
cufflinks 16.973     High  
cufflinks 17.703     High  
cufflinks 17.57     High  
cufflinks 14.488     High  
cufflinks 18.151     High  
cufflinks 19.632     High  
cufflinks 15.136     High  
cufflinks 13.914     High  
cufflinks 19.394     High  
cufflinks 19.591     High  
cufflinks 20.25     High  
cufflinks 31.002     High High
cufflinks 28.87     High High
cufflinks 10.298       Low
cufflinks 21.638     High  
cufflinks 20.12     High  
cufflinks 17.916     High  
cufflinks 17.171     High  
cufflinks 14.843     High  
cufflinks 18.06     High  
cufflinks 20.22     High  
cufflinks 16.791     High  
cufflinks 18.283     High  
cufflinks 26.063     High High

0 Strain