Gene : Bradi2g20280 B. distachyon v3.1
Defline:  (1 of 1) KOG1871//KOG1873 - Ubiquitin-specific protease // Ubiquitin-specific protease Genomic Order:  2582
Name:  ? Bradi2g20280 Secondary Identifier:  ? PAC:32775552
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g20280 0.5kb upstream 0.5kb upstream 8954 true Bd2: 17777381-17786334 Brachypodium distachyon
Bradi2g20280 0.5kb upstream 0.5kb upstream 500 false Bd2: 17785835-17786334 Brachypodium distachyon
Bradi2g20280 0.5kb downstream 0.5kb downstream 8954 true Bd2: 17776881-17785834 Brachypodium distachyon
Bradi2g20280 0.5kb downstream 0.5kb downstream 500 false Bd2: 17776881-17777380 Brachypodium distachyon
Bradi2g20280 1.0kb upstream 1.0kb upstream 9454 true Bd2: 17777381-17786834 Brachypodium distachyon
Bradi2g20280 1.0kb upstream 1.0kb upstream 1000 false Bd2: 17785835-17786834 Brachypodium distachyon
Bradi2g20280 1.0kb downstream 1.0kb downstream 9454 true Bd2: 17776381-17785834 Brachypodium distachyon
Bradi2g20280 1.0kb downstream 1.0kb downstream 1000 false Bd2: 17776381-17777380 Brachypodium distachyon
Bradi2g20280 2.0kb upstream 2.0kb upstream 10454 true Bd2: 17777381-17787834 Brachypodium distachyon
Bradi2g20280 2.0kb upstream 2.0kb upstream 2000 false Bd2: 17785835-17787834 Brachypodium distachyon
Bradi2g20280 2.0kb downstream 2.0kb downstream 10454 true Bd2: 17775381-17785834 Brachypodium distachyon
Bradi2g20280 2.0kb downstream 2.0kb downstream 2000 false Bd2: 17775381-17777380 Brachypodium distachyon
Bradi2g20280 5.0kb upstream 5.0kb upstream 13454 true Bd2: 17777381-17790834 Brachypodium distachyon
Bradi2g20280 5.0kb upstream 5.0kb upstream 5000 false Bd2: 17785835-17790834 Brachypodium distachyon
Bradi2g20280 5.0kb downstream 5.0kb downstream 13454 true Bd2: 17772381-17785834 Brachypodium distachyon
Bradi2g20280 5.0kb downstream 5.0kb downstream 5000 false Bd2: 17772381-17777380 Brachypodium distachyon
Bradi2g20280 10.0kb upstream 10.0kb upstream 18454 true Bd2: 17777381-17795834 Brachypodium distachyon
Bradi2g20280 10.0kb upstream 10.0kb upstream 10000 false Bd2: 17785835-17795834 Brachypodium distachyon
Bradi2g20280 10.0kb downstream 10.0kb downstream 18454 true Bd2: 17767381-17785834 Brachypodium distachyon
Bradi2g20280 10.0kb downstream 10.0kb downstream 10000 false Bd2: 17767381-17777380 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124571102 5269 Grass View MSA
122045970 5273 Angiosperm View MSA
121346163 5274 Embryophyte View MSA
123428412 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.977        
cufflinks 4.922        
cufflinks 5.265        
cufflinks 3.812        
cufflinks 2.16       Low
cufflinks 4.178        
cufflinks 4.412        
cufflinks 3.161        
cufflinks 3.976        
cufflinks 4.457        
cufflinks 3.789        
cufflinks 4.453        
cufflinks 3.477        
cufflinks 3.072        
cufflinks 3.123        
cufflinks 4.026        
cufflinks 3.335        
cufflinks 4.272        
cufflinks 6.053       High
cufflinks 2.701       Low
cufflinks 3.063        
cufflinks 6.269       High
cufflinks 3.291        
cufflinks 3.486        
cufflinks 4.036        
cufflinks 5.258        
cufflinks 4.64        
cufflinks 5.609       High
cufflinks 5.726       High
cufflinks 4.092        

0 Strain