Gene : Bradi2g20320 B. distachyon v3.1
Defline:  (1 of 2) PTHR10302//PTHR10302:SF6 - SINGLE-STRANDED DNA-BINDING PROTEIN // SINGLE-STRANDED DNA-BINDING PROTEIN, MITOCHONDRIAL Genomic Order:  2586
Name:  ? Bradi2g20320 Secondary Identifier:  ? PAC:32782368
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g20320 0.5kb upstream 0.5kb upstream 7285 true Bd2: 17841950-17849234 Brachypodium distachyon
Bradi2g20320 0.5kb upstream 0.5kb upstream 500 false Bd2: 17841950-17842449 Brachypodium distachyon
Bradi2g20320 0.5kb downstream 0.5kb downstream 7285 true Bd2: 17842450-17849734 Brachypodium distachyon
Bradi2g20320 0.5kb downstream 0.5kb downstream 500 false Bd2: 17849235-17849734 Brachypodium distachyon
Bradi2g20320 1.0kb upstream 1.0kb upstream 7785 true Bd2: 17841450-17849234 Brachypodium distachyon
Bradi2g20320 1.0kb upstream 1.0kb upstream 1000 false Bd2: 17841450-17842449 Brachypodium distachyon
Bradi2g20320 1.0kb downstream 1.0kb downstream 7785 true Bd2: 17842450-17850234 Brachypodium distachyon
Bradi2g20320 1.0kb downstream 1.0kb downstream 1000 false Bd2: 17849235-17850234 Brachypodium distachyon
Bradi2g20320 2.0kb upstream 2.0kb upstream 8785 true Bd2: 17840450-17849234 Brachypodium distachyon
Bradi2g20320 2.0kb upstream 2.0kb upstream 2000 false Bd2: 17840450-17842449 Brachypodium distachyon
Bradi2g20320 2.0kb downstream 2.0kb downstream 8785 true Bd2: 17842450-17851234 Brachypodium distachyon
Bradi2g20320 2.0kb downstream 2.0kb downstream 2000 false Bd2: 17849235-17851234 Brachypodium distachyon
Bradi2g20320 5.0kb upstream 5.0kb upstream 11785 true Bd2: 17837450-17849234 Brachypodium distachyon
Bradi2g20320 5.0kb upstream 5.0kb upstream 5000 false Bd2: 17837450-17842449 Brachypodium distachyon
Bradi2g20320 5.0kb downstream 5.0kb downstream 11785 true Bd2: 17842450-17854234 Brachypodium distachyon
Bradi2g20320 5.0kb downstream 5.0kb downstream 5000 false Bd2: 17849235-17854234 Brachypodium distachyon
Bradi2g20320 10.0kb upstream 10.0kb upstream 16785 true Bd2: 17832450-17849234 Brachypodium distachyon
Bradi2g20320 10.0kb upstream 10.0kb upstream 10000 false Bd2: 17832450-17842449 Brachypodium distachyon
Bradi2g20320 10.0kb downstream 10.0kb downstream 16785 true Bd2: 17842450-17859234 Brachypodium distachyon
Bradi2g20320 10.0kb downstream 10.0kb downstream 10000 false Bd2: 17849235-17859234 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573761 5269 Grass View MSA
122047632 5273 Angiosperm View MSA
121349645 5274 Embryophyte View MSA
123381385 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.357        
cufflinks 0.377        
cufflinks 0.325        
cufflinks 0.444        
cufflinks 0.281        
cufflinks 0.331        
cufflinks 0.341        
cufflinks 0.319        
cufflinks 0.356        
cufflinks 0.356        
cufflinks 0.039     Low Low
cufflinks 0.315        
cufflinks 0.049     Low Low
cufflinks 0.043     Low Low
cufflinks 0.205        
cufflinks 0.351        
cufflinks 0.479        
cufflinks 0.578       High
cufflinks 0.375        
cufflinks 0.074     Low Low
cufflinks 0.465        
cufflinks 0.386        
cufflinks 0.271        
cufflinks 0.272        
cufflinks 0.427        
cufflinks 0.407        
cufflinks 0.045     Low Low
cufflinks 0.324        
cufflinks 0.321        
cufflinks 0.4        

0 Strain