Gene : Bradi2g20580 B. distachyon v3.1
Defline:  (1 of 2) K14763 - H/ACA ribonucleoprotein complex non-core subunit NAF1 (NAF1) Genomic Order:  2617
Name:  ? Bradi2g20580 Secondary Identifier:  ? PAC:32775212
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g20580 0.5kb upstream 0.5kb upstream 3986 true Bd2: 18072347-18076332 Brachypodium distachyon
Bradi2g20580 0.5kb upstream 0.5kb upstream 500 false Bd2: 18072347-18072846 Brachypodium distachyon
Bradi2g20580 0.5kb downstream 0.5kb downstream 3986 true Bd2: 18072847-18076832 Brachypodium distachyon
Bradi2g20580 0.5kb downstream 0.5kb downstream 500 false Bd2: 18076333-18076832 Brachypodium distachyon
Bradi2g20580 1.0kb upstream 1.0kb upstream 4486 true Bd2: 18071847-18076332 Brachypodium distachyon
Bradi2g20580 1.0kb upstream 1.0kb upstream 1000 false Bd2: 18071847-18072846 Brachypodium distachyon
Bradi2g20580 1.0kb downstream 1.0kb downstream 4486 true Bd2: 18072847-18077332 Brachypodium distachyon
Bradi2g20580 1.0kb downstream 1.0kb downstream 1000 false Bd2: 18076333-18077332 Brachypodium distachyon
Bradi2g20580 2.0kb upstream 2.0kb upstream 5486 true Bd2: 18070847-18076332 Brachypodium distachyon
Bradi2g20580 2.0kb upstream 2.0kb upstream 2000 false Bd2: 18070847-18072846 Brachypodium distachyon
Bradi2g20580 2.0kb downstream 2.0kb downstream 5486 true Bd2: 18072847-18078332 Brachypodium distachyon
Bradi2g20580 2.0kb downstream 2.0kb downstream 2000 false Bd2: 18076333-18078332 Brachypodium distachyon
Bradi2g20580 5.0kb upstream 5.0kb upstream 8486 true Bd2: 18067847-18076332 Brachypodium distachyon
Bradi2g20580 5.0kb upstream 5.0kb upstream 5000 false Bd2: 18067847-18072846 Brachypodium distachyon
Bradi2g20580 5.0kb downstream 5.0kb downstream 8486 true Bd2: 18072847-18081332 Brachypodium distachyon
Bradi2g20580 5.0kb downstream 5.0kb downstream 5000 false Bd2: 18076333-18081332 Brachypodium distachyon
Bradi2g20580 10.0kb upstream 10.0kb upstream 13486 true Bd2: 18062847-18076332 Brachypodium distachyon
Bradi2g20580 10.0kb upstream 10.0kb upstream 10000 false Bd2: 18062847-18072846 Brachypodium distachyon
Bradi2g20580 10.0kb downstream 10.0kb downstream 13486 true Bd2: 18072847-18086332 Brachypodium distachyon
Bradi2g20580 10.0kb downstream 10.0kb downstream 10000 false Bd2: 18076333-18086332 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041036 5273 Angiosperm View MSA
124589364 5269 Grass View MSA
121343792 5274 Embryophyte View MSA
123424387 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.824        
cufflinks 7.713        
cufflinks 7.121        
cufflinks 6.33        
cufflinks 3.07       Low
cufflinks 7.995       High
cufflinks 6.905        
cufflinks 5.497        
cufflinks 6.637        
cufflinks 3.6        
cufflinks 4.882        
cufflinks 8.092       High
cufflinks 4.654        
cufflinks 4.136        
cufflinks 6.094        
cufflinks 7.414        
cufflinks 3.854        
cufflinks 6.806        
cufflinks 2.734       Low
cufflinks 1.717       Low
cufflinks 4.157        
cufflinks 5.499        
cufflinks 4.983        
cufflinks 5.726        
cufflinks 6.279        
cufflinks 5.659        
cufflinks 6.984        
cufflinks 5.245        
cufflinks 5.285        
cufflinks 6.742        

0 Strain