Gene : Bradi2g27190 B. distachyon v3.1
Defline:  (1 of 3) K03626 - nascent polypeptide-associated complex subunit alpha (EGD2, NACA) Genomic Order:  3497
Name:  ? Bradi2g27190 Secondary Identifier:  ? PAC:32782013
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g27190 0.5kb upstream 0.5kb upstream 2977 true Bd2: 26006350-26009326 Brachypodium distachyon
Bradi2g27190 0.5kb upstream 0.5kb upstream 500 false Bd2: 26008827-26009326 Brachypodium distachyon
Bradi2g27190 0.5kb downstream 0.5kb downstream 2977 true Bd2: 26005850-26008826 Brachypodium distachyon
Bradi2g27190 0.5kb downstream 0.5kb downstream 500 false Bd2: 26005850-26006349 Brachypodium distachyon
Bradi2g27190 1.0kb upstream 1.0kb upstream 3477 true Bd2: 26006350-26009826 Brachypodium distachyon
Bradi2g27190 1.0kb upstream 1.0kb upstream 1000 false Bd2: 26008827-26009826 Brachypodium distachyon
Bradi2g27190 1.0kb downstream 1.0kb downstream 3477 true Bd2: 26005350-26008826 Brachypodium distachyon
Bradi2g27190 1.0kb downstream 1.0kb downstream 1000 false Bd2: 26005350-26006349 Brachypodium distachyon
Bradi2g27190 2.0kb upstream 2.0kb upstream 4477 true Bd2: 26006350-26010826 Brachypodium distachyon
Bradi2g27190 2.0kb upstream 2.0kb upstream 2000 false Bd2: 26008827-26010826 Brachypodium distachyon
Bradi2g27190 2.0kb downstream 2.0kb downstream 4477 true Bd2: 26004350-26008826 Brachypodium distachyon
Bradi2g27190 2.0kb downstream 2.0kb downstream 2000 false Bd2: 26004350-26006349 Brachypodium distachyon
Bradi2g27190 5.0kb upstream 5.0kb upstream 7477 true Bd2: 26006350-26013826 Brachypodium distachyon
Bradi2g27190 5.0kb upstream 5.0kb upstream 5000 false Bd2: 26008827-26013826 Brachypodium distachyon
Bradi2g27190 5.0kb downstream 5.0kb downstream 7477 true Bd2: 26001350-26008826 Brachypodium distachyon
Bradi2g27190 5.0kb downstream 5.0kb downstream 5000 false Bd2: 26001350-26006349 Brachypodium distachyon
Bradi2g27190 10.0kb upstream 10.0kb upstream 12477 true Bd2: 26006350-26018826 Brachypodium distachyon
Bradi2g27190 10.0kb upstream 10.0kb upstream 10000 false Bd2: 26008827-26018826 Brachypodium distachyon
Bradi2g27190 10.0kb downstream 10.0kb downstream 12477 true Bd2: 25996350-26008826 Brachypodium distachyon
Bradi2g27190 10.0kb downstream 10.0kb downstream 10000 false Bd2: 25996350-26006349 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124588662 5269 Grass View MSA
122043596 5273 Angiosperm View MSA
121351312 5274 Embryophyte View MSA
123424753 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 72.74     High  
cufflinks 57.323     High  
cufflinks 52.043     High  
cufflinks 67.554     High  
cufflinks 68.91     High  
cufflinks 50.923     High  
cufflinks 56.698     High  
cufflinks 45.319     High  
cufflinks 46.568     High  
cufflinks 51.568     High  
cufflinks 19.15     High Low
cufflinks 49.185     High  
cufflinks 15.672     High Low
cufflinks 20.09     High Low
cufflinks 49.253     High  
cufflinks 54.99     High  
cufflinks 95.017     High High
cufflinks 132.459     High High
cufflinks 94.937     High High
cufflinks 96.046     High High
cufflinks 118.832     High High
cufflinks 38.317     High  
cufflinks 40.321     High  
cufflinks 43.252     High  
cufflinks 55.628     High  
cufflinks 53.882     High  
cufflinks 19.609     High Low
cufflinks 46.258     High  
cufflinks 44.488     High  
cufflinks 100.524     High High

0 Strain