Gene : Bradi2g24880 B. distachyon v3.1
Defline:  (1 of 10) KOG2922 - Uncharacterized conserved protein Genomic Order:  3145
Name:  ? Bradi2g24880 Secondary Identifier:  ? PAC:32779755
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g24880 0.5kb upstream 0.5kb upstream 5034 true Bd2: 22666246-22671279 Brachypodium distachyon
Bradi2g24880 0.5kb upstream 0.5kb upstream 500 false Bd2: 22666246-22666745 Brachypodium distachyon
Bradi2g24880 0.5kb downstream 0.5kb downstream 5034 true Bd2: 22666746-22671779 Brachypodium distachyon
Bradi2g24880 0.5kb downstream 0.5kb downstream 500 false Bd2: 22671280-22671779 Brachypodium distachyon
Bradi2g24880 1.0kb upstream 1.0kb upstream 5534 true Bd2: 22665746-22671279 Brachypodium distachyon
Bradi2g24880 1.0kb upstream 1.0kb upstream 1000 false Bd2: 22665746-22666745 Brachypodium distachyon
Bradi2g24880 1.0kb downstream 1.0kb downstream 5534 true Bd2: 22666746-22672279 Brachypodium distachyon
Bradi2g24880 1.0kb downstream 1.0kb downstream 1000 false Bd2: 22671280-22672279 Brachypodium distachyon
Bradi2g24880 2.0kb upstream 2.0kb upstream 6534 true Bd2: 22664746-22671279 Brachypodium distachyon
Bradi2g24880 2.0kb upstream 2.0kb upstream 2000 false Bd2: 22664746-22666745 Brachypodium distachyon
Bradi2g24880 2.0kb downstream 2.0kb downstream 6534 true Bd2: 22666746-22673279 Brachypodium distachyon
Bradi2g24880 2.0kb downstream 2.0kb downstream 2000 false Bd2: 22671280-22673279 Brachypodium distachyon
Bradi2g24880 5.0kb upstream 5.0kb upstream 9534 true Bd2: 22661746-22671279 Brachypodium distachyon
Bradi2g24880 5.0kb upstream 5.0kb upstream 5000 false Bd2: 22661746-22666745 Brachypodium distachyon
Bradi2g24880 5.0kb downstream 5.0kb downstream 9534 true Bd2: 22666746-22676279 Brachypodium distachyon
Bradi2g24880 5.0kb downstream 5.0kb downstream 5000 false Bd2: 22671280-22676279 Brachypodium distachyon
Bradi2g24880 10.0kb upstream 10.0kb upstream 14534 true Bd2: 22656746-22671279 Brachypodium distachyon
Bradi2g24880 10.0kb upstream 10.0kb upstream 10000 false Bd2: 22656746-22666745 Brachypodium distachyon
Bradi2g24880 10.0kb downstream 10.0kb downstream 14534 true Bd2: 22666746-22681279 Brachypodium distachyon
Bradi2g24880 10.0kb downstream 10.0kb downstream 10000 false Bd2: 22671280-22681279 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574188 5269 Grass View MSA
122049852 5273 Angiosperm View MSA
121350958 5274 Embryophyte View MSA
123428746 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.495       High
cufflinks 3.004        
cufflinks 3.416        
cufflinks 2.919        
cufflinks 1.989       Low
cufflinks 2.641        
cufflinks 2.524        
cufflinks 3.066        
cufflinks 3.083        
cufflinks 3.179        
cufflinks 2.435        
cufflinks 2.64        
cufflinks 1.946       Low
cufflinks 2.015       Low
cufflinks 3.585        
cufflinks 2.822        
cufflinks 3.212        
cufflinks 4.548       High
cufflinks 3.905        
cufflinks 2.079       Low
cufflinks 4.847       High
cufflinks 3.554        
cufflinks 2.809        
cufflinks 2.949        
cufflinks 2.637        
cufflinks 3.191        
cufflinks 2.822        
cufflinks 3.26        
cufflinks 3.176        
cufflinks 3.554        

0 Strain