Gene : Bradi2g25310 B. distachyon v3.1
Defline:  (1 of 5) K12373 - hexosaminidase (HEXA_B) Genomic Order:  3204
Name:  ? Bradi2g25310 Secondary Identifier:  ? PAC:32779068
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-6902 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g25310 0.5kb upstream 0.5kb upstream 6825 true Bd2: 23230349-23237173 Brachypodium distachyon
Bradi2g25310 0.5kb upstream 0.5kb upstream 500 false Bd2: 23236674-23237173 Brachypodium distachyon
Bradi2g25310 0.5kb downstream 0.5kb downstream 6825 true Bd2: 23229849-23236673 Brachypodium distachyon
Bradi2g25310 0.5kb downstream 0.5kb downstream 500 false Bd2: 23229849-23230348 Brachypodium distachyon
Bradi2g25310 1.0kb upstream 1.0kb upstream 7325 true Bd2: 23230349-23237673 Brachypodium distachyon
Bradi2g25310 1.0kb upstream 1.0kb upstream 1000 false Bd2: 23236674-23237673 Brachypodium distachyon
Bradi2g25310 1.0kb downstream 1.0kb downstream 7325 true Bd2: 23229349-23236673 Brachypodium distachyon
Bradi2g25310 1.0kb downstream 1.0kb downstream 1000 false Bd2: 23229349-23230348 Brachypodium distachyon
Bradi2g25310 2.0kb upstream 2.0kb upstream 8325 true Bd2: 23230349-23238673 Brachypodium distachyon
Bradi2g25310 2.0kb upstream 2.0kb upstream 2000 false Bd2: 23236674-23238673 Brachypodium distachyon
Bradi2g25310 2.0kb downstream 2.0kb downstream 8325 true Bd2: 23228349-23236673 Brachypodium distachyon
Bradi2g25310 2.0kb downstream 2.0kb downstream 2000 false Bd2: 23228349-23230348 Brachypodium distachyon
Bradi2g25310 5.0kb upstream 5.0kb upstream 11325 true Bd2: 23230349-23241673 Brachypodium distachyon
Bradi2g25310 5.0kb upstream 5.0kb upstream 5000 false Bd2: 23236674-23241673 Brachypodium distachyon
Bradi2g25310 5.0kb downstream 5.0kb downstream 11325 true Bd2: 23225349-23236673 Brachypodium distachyon
Bradi2g25310 5.0kb downstream 5.0kb downstream 5000 false Bd2: 23225349-23230348 Brachypodium distachyon
Bradi2g25310 10.0kb upstream 10.0kb upstream 16325 true Bd2: 23230349-23246673 Brachypodium distachyon
Bradi2g25310 10.0kb upstream 10.0kb upstream 10000 false Bd2: 23236674-23246673 Brachypodium distachyon
Bradi2g25310 10.0kb downstream 10.0kb downstream 16325 true Bd2: 23220349-23236673 Brachypodium distachyon
Bradi2g25310 10.0kb downstream 10.0kb downstream 10000 false Bd2: 23220349-23230348 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576721 5269 Grass View MSA
122047167 5273 Angiosperm View MSA
121346826 5274 Embryophyte View MSA
123428053 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.721        
cufflinks 2.743        
cufflinks 2.716        
cufflinks 2.875        
cufflinks 3.791        
cufflinks 2.617        
cufflinks 2.246        
cufflinks 2.272        
cufflinks 2.107        
cufflinks 1.695        
cufflinks 0.012     Low Low
cufflinks 2.286        
cufflinks 0.726        
cufflinks 0.042     Low Low
cufflinks 1.891        
cufflinks 2.517        
cufflinks 2.425        
cufflinks 2.442        
cufflinks 1.573        
cufflinks 0.168       Low
cufflinks 1.348        
cufflinks 1.951        
cufflinks 2.468        
cufflinks 2.397        
cufflinks 2.326        
cufflinks 2.72        
cufflinks 0.025     Low Low
cufflinks 2.218        
cufflinks 2.057        
cufflinks 3.076        

0 Strain