Gene : Bradi2g34560 B. distachyon v3.1
Defline:  (1 of 1) PTHR11040//PTHR11040:SF26 - ZINC/IRON TRANSPORTER // ZINC TRANSPORTER 6, CHLOROPLASTIC Genomic Order:  4070
Name:  ? Bradi2g34560 Secondary Identifier:  ? PAC:32779296
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g34560 0.5kb upstream 0.5kb upstream 5101 true Bd2: 34398245-34403345 Brachypodium distachyon
Bradi2g34560 0.5kb upstream 0.5kb upstream 500 false Bd2: 34398245-34398744 Brachypodium distachyon
Bradi2g34560 0.5kb downstream 0.5kb downstream 5101 true Bd2: 34398745-34403845 Brachypodium distachyon
Bradi2g34560 0.5kb downstream 0.5kb downstream 500 false Bd2: 34403346-34403845 Brachypodium distachyon
Bradi2g34560 1.0kb upstream 1.0kb upstream 5601 true Bd2: 34397745-34403345 Brachypodium distachyon
Bradi2g34560 1.0kb upstream 1.0kb upstream 1000 false Bd2: 34397745-34398744 Brachypodium distachyon
Bradi2g34560 1.0kb downstream 1.0kb downstream 5601 true Bd2: 34398745-34404345 Brachypodium distachyon
Bradi2g34560 1.0kb downstream 1.0kb downstream 1000 false Bd2: 34403346-34404345 Brachypodium distachyon
Bradi2g34560 2.0kb upstream 2.0kb upstream 6601 true Bd2: 34396745-34403345 Brachypodium distachyon
Bradi2g34560 2.0kb upstream 2.0kb upstream 2000 false Bd2: 34396745-34398744 Brachypodium distachyon
Bradi2g34560 2.0kb downstream 2.0kb downstream 6601 true Bd2: 34398745-34405345 Brachypodium distachyon
Bradi2g34560 2.0kb downstream 2.0kb downstream 2000 false Bd2: 34403346-34405345 Brachypodium distachyon
Bradi2g34560 5.0kb upstream 5.0kb upstream 9601 true Bd2: 34393745-34403345 Brachypodium distachyon
Bradi2g34560 5.0kb upstream 5.0kb upstream 5000 false Bd2: 34393745-34398744 Brachypodium distachyon
Bradi2g34560 5.0kb downstream 5.0kb downstream 9601 true Bd2: 34398745-34408345 Brachypodium distachyon
Bradi2g34560 5.0kb downstream 5.0kb downstream 5000 false Bd2: 34403346-34408345 Brachypodium distachyon
Bradi2g34560 10.0kb upstream 10.0kb upstream 14601 true Bd2: 34388745-34403345 Brachypodium distachyon
Bradi2g34560 10.0kb upstream 10.0kb upstream 10000 false Bd2: 34388745-34398744 Brachypodium distachyon
Bradi2g34560 10.0kb downstream 10.0kb downstream 14601 true Bd2: 34398745-34413345 Brachypodium distachyon
Bradi2g34560 10.0kb downstream 10.0kb downstream 10000 false Bd2: 34403346-34413345 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124584547 5269 Grass View MSA
122046721 5273 Angiosperm View MSA
121310647 5274 Embryophyte View MSA
123428132 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.385        
cufflinks 0.38        
cufflinks 0.561        
cufflinks 0.433        
cufflinks 0.194       Low
cufflinks 0.322       Low
cufflinks 0.413        
cufflinks 0.549        
cufflinks 0.408        
cufflinks 0.779       High
cufflinks 1.045       High
cufflinks 0.37        
cufflinks 0.615        
cufflinks 0.819       High
cufflinks 0.603        
cufflinks 0.401        
cufflinks 0.43        
cufflinks 1.145       High
cufflinks 0.524        
cufflinks 0.428        
cufflinks 0.652        
cufflinks 0.477        
cufflinks 0.444        
cufflinks 0.487        
cufflinks 0.366        
cufflinks 0.65        
cufflinks 0.61        
cufflinks 0.638        
cufflinks 0.54        
cufflinks 0.416        

0 Strain