Gene : Bradi4g40507 B. distachyon v3.1
Defline:  (1 of 2) KOG4508 - Uncharacterized conserved protein Genomic Order:  5220
Name:  ? Bradi4g40507 Secondary Identifier:  ? PAC:32783631
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g40507 0.5kb upstream 0.5kb upstream 6278 true Bd4: 44838548-44844825 Brachypodium distachyon
Bradi4g40507 0.5kb upstream 0.5kb upstream 500 false Bd4: 44844326-44844825 Brachypodium distachyon
Bradi4g40507 0.5kb downstream 0.5kb downstream 6278 true Bd4: 44838048-44844325 Brachypodium distachyon
Bradi4g40507 0.5kb downstream 0.5kb downstream 500 false Bd4: 44838048-44838547 Brachypodium distachyon
Bradi4g40507 1.0kb upstream 1.0kb upstream 6778 true Bd4: 44838548-44845325 Brachypodium distachyon
Bradi4g40507 1.0kb upstream 1.0kb upstream 1000 false Bd4: 44844326-44845325 Brachypodium distachyon
Bradi4g40507 1.0kb downstream 1.0kb downstream 6778 true Bd4: 44837548-44844325 Brachypodium distachyon
Bradi4g40507 1.0kb downstream 1.0kb downstream 1000 false Bd4: 44837548-44838547 Brachypodium distachyon
Bradi4g40507 2.0kb upstream 2.0kb upstream 7778 true Bd4: 44838548-44846325 Brachypodium distachyon
Bradi4g40507 2.0kb upstream 2.0kb upstream 2000 false Bd4: 44844326-44846325 Brachypodium distachyon
Bradi4g40507 2.0kb downstream 2.0kb downstream 7778 true Bd4: 44836548-44844325 Brachypodium distachyon
Bradi4g40507 2.0kb downstream 2.0kb downstream 2000 false Bd4: 44836548-44838547 Brachypodium distachyon
Bradi4g40507 5.0kb upstream 5.0kb upstream 10778 true Bd4: 44838548-44849325 Brachypodium distachyon
Bradi4g40507 5.0kb upstream 5.0kb upstream 5000 false Bd4: 44844326-44849325 Brachypodium distachyon
Bradi4g40507 5.0kb downstream 5.0kb downstream 10778 true Bd4: 44833548-44844325 Brachypodium distachyon
Bradi4g40507 5.0kb downstream 5.0kb downstream 5000 false Bd4: 44833548-44838547 Brachypodium distachyon
Bradi4g40507 10.0kb upstream 10.0kb upstream 15778 true Bd4: 44838548-44854325 Brachypodium distachyon
Bradi4g40507 10.0kb upstream 10.0kb upstream 10000 false Bd4: 44844326-44854325 Brachypodium distachyon
Bradi4g40507 10.0kb downstream 10.0kb downstream 15778 true Bd4: 44828548-44844325 Brachypodium distachyon
Bradi4g40507 10.0kb downstream 10.0kb downstream 10000 false Bd4: 44828548-44838547 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576444 5269 Grass View MSA
122047159 5273 Angiosperm View MSA
121348549 5274 Embryophyte View MSA
123425506 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.599        
cufflinks 7.715        
cufflinks 7.767        
cufflinks 6.848        
cufflinks 6.431        
cufflinks 8.591        
cufflinks 8.771        
cufflinks 6.091        
cufflinks 7.564        
cufflinks 6.784        
cufflinks 7.251        
cufflinks 7.0        
cufflinks 6.109        
cufflinks 6.366        
cufflinks 4.659       Low
cufflinks 9.129        
cufflinks 7.272        
cufflinks 13.336     High High
cufflinks 8.705        
cufflinks 5.74        
cufflinks 9.629        
cufflinks 6.777        
cufflinks 5.812        
cufflinks 7.53        
cufflinks 8.32        
cufflinks 8.889        
cufflinks 8.467        
cufflinks 7.452        
cufflinks 6.377        
cufflinks 10.541       High

0 Strain