Gene : Bradi2g34520 B. distachyon v3.1
Defline:  (1 of 1) PTHR31301:SF2 - LOB DOMAIN-CONTAINING PROTEIN 15 Genomic Order:  4064
Name:  ? Bradi2g34520 Secondary Identifier:  ? PAC:32772869
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g34520 0.5kb upstream 0.5kb upstream 3092 true Bd2: 34345206-34348297 Brachypodium distachyon
Bradi2g34520 0.5kb upstream 0.5kb upstream 500 false Bd2: 34345206-34345705 Brachypodium distachyon
Bradi2g34520 0.5kb downstream 0.5kb downstream 3092 true Bd2: 34345706-34348797 Brachypodium distachyon
Bradi2g34520 0.5kb downstream 0.5kb downstream 500 false Bd2: 34348298-34348797 Brachypodium distachyon
Bradi2g34520 1.0kb upstream 1.0kb upstream 3592 true Bd2: 34344706-34348297 Brachypodium distachyon
Bradi2g34520 1.0kb upstream 1.0kb upstream 1000 false Bd2: 34344706-34345705 Brachypodium distachyon
Bradi2g34520 1.0kb downstream 1.0kb downstream 3592 true Bd2: 34345706-34349297 Brachypodium distachyon
Bradi2g34520 1.0kb downstream 1.0kb downstream 1000 false Bd2: 34348298-34349297 Brachypodium distachyon
Bradi2g34520 2.0kb upstream 2.0kb upstream 4592 true Bd2: 34343706-34348297 Brachypodium distachyon
Bradi2g34520 2.0kb upstream 2.0kb upstream 2000 false Bd2: 34343706-34345705 Brachypodium distachyon
Bradi2g34520 2.0kb downstream 2.0kb downstream 4592 true Bd2: 34345706-34350297 Brachypodium distachyon
Bradi2g34520 2.0kb downstream 2.0kb downstream 2000 false Bd2: 34348298-34350297 Brachypodium distachyon
Bradi2g34520 5.0kb upstream 5.0kb upstream 7592 true Bd2: 34340706-34348297 Brachypodium distachyon
Bradi2g34520 5.0kb upstream 5.0kb upstream 5000 false Bd2: 34340706-34345705 Brachypodium distachyon
Bradi2g34520 5.0kb downstream 5.0kb downstream 7592 true Bd2: 34345706-34353297 Brachypodium distachyon
Bradi2g34520 5.0kb downstream 5.0kb downstream 5000 false Bd2: 34348298-34353297 Brachypodium distachyon
Bradi2g34520 10.0kb upstream 10.0kb upstream 12592 true Bd2: 34335706-34348297 Brachypodium distachyon
Bradi2g34520 10.0kb upstream 10.0kb upstream 10000 false Bd2: 34335706-34345705 Brachypodium distachyon
Bradi2g34520 10.0kb downstream 10.0kb downstream 12592 true Bd2: 34345706-34358297 Brachypodium distachyon
Bradi2g34520 10.0kb downstream 10.0kb downstream 10000 false Bd2: 34348298-34358297 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124575933 5269 Grass View MSA
122043702 5273 Angiosperm View MSA
121351035 5274 Embryophyte View MSA
123381985 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.008     Low  
cufflinks 0.01     Low  
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.008     Low  
cufflinks 0.909       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low  
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain