Gene : Bradi4g41240 B. distachyon v3.1
Defline:  (1 of 1) PTHR11669//PTHR11669:SF17 - REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT // REPLICATION FACTOR C SUBUNIT 4 Genomic Order:  5309
Name:  ? Bradi4g41240 Secondary Identifier:  ? PAC:32785673
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g41240 0.5kb upstream 0.5kb upstream 4842 true Bd4: 45326973-45331814 Brachypodium distachyon
Bradi4g41240 0.5kb upstream 0.5kb upstream 500 false Bd4: 45331315-45331814 Brachypodium distachyon
Bradi4g41240 0.5kb downstream 0.5kb downstream 4842 true Bd4: 45326473-45331314 Brachypodium distachyon
Bradi4g41240 0.5kb downstream 0.5kb downstream 500 false Bd4: 45326473-45326972 Brachypodium distachyon
Bradi4g41240 1.0kb upstream 1.0kb upstream 5342 true Bd4: 45326973-45332314 Brachypodium distachyon
Bradi4g41240 1.0kb upstream 1.0kb upstream 1000 false Bd4: 45331315-45332314 Brachypodium distachyon
Bradi4g41240 1.0kb downstream 1.0kb downstream 5342 true Bd4: 45325973-45331314 Brachypodium distachyon
Bradi4g41240 1.0kb downstream 1.0kb downstream 1000 false Bd4: 45325973-45326972 Brachypodium distachyon
Bradi4g41240 2.0kb upstream 2.0kb upstream 6342 true Bd4: 45326973-45333314 Brachypodium distachyon
Bradi4g41240 2.0kb upstream 2.0kb upstream 2000 false Bd4: 45331315-45333314 Brachypodium distachyon
Bradi4g41240 2.0kb downstream 2.0kb downstream 6342 true Bd4: 45324973-45331314 Brachypodium distachyon
Bradi4g41240 2.0kb downstream 2.0kb downstream 2000 false Bd4: 45324973-45326972 Brachypodium distachyon
Bradi4g41240 5.0kb upstream 5.0kb upstream 9342 true Bd4: 45326973-45336314 Brachypodium distachyon
Bradi4g41240 5.0kb upstream 5.0kb upstream 5000 false Bd4: 45331315-45336314 Brachypodium distachyon
Bradi4g41240 5.0kb downstream 5.0kb downstream 9342 true Bd4: 45321973-45331314 Brachypodium distachyon
Bradi4g41240 5.0kb downstream 5.0kb downstream 5000 false Bd4: 45321973-45326972 Brachypodium distachyon
Bradi4g41240 10.0kb upstream 10.0kb upstream 14342 true Bd4: 45326973-45341314 Brachypodium distachyon
Bradi4g41240 10.0kb upstream 10.0kb upstream 10000 false Bd4: 45331315-45341314 Brachypodium distachyon
Bradi4g41240 10.0kb downstream 10.0kb downstream 14342 true Bd4: 45316973-45331314 Brachypodium distachyon
Bradi4g41240 10.0kb downstream 10.0kb downstream 10000 false Bd4: 45316973-45326972 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041075 5273 Angiosperm View MSA
124579979 5269 Grass View MSA
121346056 5274 Embryophyte View MSA
123424600 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.232        
cufflinks 1.852        
cufflinks 1.851        
cufflinks 1.715        
cufflinks 0.811       Low
cufflinks 1.426        
cufflinks 1.659        
cufflinks 1.315        
cufflinks 1.545        
cufflinks 1.205        
cufflinks 0.955        
cufflinks 1.077        
cufflinks 0.427       Low
cufflinks 0.879        
cufflinks 0.558       Low
cufflinks 1.472        
cufflinks 1.486        
cufflinks 2.886       High
cufflinks 1.906        
cufflinks 0.86       Low
cufflinks 1.629        
cufflinks 1.557        
cufflinks 1.276        
cufflinks 1.286        
cufflinks 1.716        
cufflinks 1.719        
cufflinks 0.869        
cufflinks 1.639        
cufflinks 1.511        
cufflinks 1.598        

0 Strain