Gene : Bradi2g34960 B. distachyon v3.1
Defline:  (1 of 1) K10389 - tubulin gamma (TUBG) Genomic Order:  4119
Name:  ? Bradi2g34960 Secondary Identifier:  ? PAC:32773169
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-5695 Brachypodium distachyon pathologic  
Bdistachyon PWY-6608 Brachypodium distachyon pathologic  
Bdistachyon PWY-6609 Brachypodium distachyon pathologic  
Bdistachyon PWY-7179 Brachypodium distachyon pathologic  
Bdistachyon SALVADEHYPOX-PWY Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g34960 0.5kb upstream 0.5kb upstream 6327 true Bd2: 34775094-34781420 Brachypodium distachyon
Bradi2g34960 0.5kb upstream 0.5kb upstream 500 false Bd2: 34780921-34781420 Brachypodium distachyon
Bradi2g34960 0.5kb downstream 0.5kb downstream 6327 true Bd2: 34774594-34780920 Brachypodium distachyon
Bradi2g34960 0.5kb downstream 0.5kb downstream 500 false Bd2: 34774594-34775093 Brachypodium distachyon
Bradi2g34960 1.0kb upstream 1.0kb upstream 6827 true Bd2: 34775094-34781920 Brachypodium distachyon
Bradi2g34960 1.0kb upstream 1.0kb upstream 1000 false Bd2: 34780921-34781920 Brachypodium distachyon
Bradi2g34960 1.0kb downstream 1.0kb downstream 6827 true Bd2: 34774094-34780920 Brachypodium distachyon
Bradi2g34960 1.0kb downstream 1.0kb downstream 1000 false Bd2: 34774094-34775093 Brachypodium distachyon
Bradi2g34960 2.0kb upstream 2.0kb upstream 7827 true Bd2: 34775094-34782920 Brachypodium distachyon
Bradi2g34960 2.0kb upstream 2.0kb upstream 2000 false Bd2: 34780921-34782920 Brachypodium distachyon
Bradi2g34960 2.0kb downstream 2.0kb downstream 7827 true Bd2: 34773094-34780920 Brachypodium distachyon
Bradi2g34960 2.0kb downstream 2.0kb downstream 2000 false Bd2: 34773094-34775093 Brachypodium distachyon
Bradi2g34960 5.0kb upstream 5.0kb upstream 10827 true Bd2: 34775094-34785920 Brachypodium distachyon
Bradi2g34960 5.0kb upstream 5.0kb upstream 5000 false Bd2: 34780921-34785920 Brachypodium distachyon
Bradi2g34960 5.0kb downstream 5.0kb downstream 10827 true Bd2: 34770094-34780920 Brachypodium distachyon
Bradi2g34960 5.0kb downstream 5.0kb downstream 5000 false Bd2: 34770094-34775093 Brachypodium distachyon
Bradi2g34960 10.0kb upstream 10.0kb upstream 15827 true Bd2: 34775094-34790920 Brachypodium distachyon
Bradi2g34960 10.0kb upstream 10.0kb upstream 10000 false Bd2: 34780921-34790920 Brachypodium distachyon
Bradi2g34960 10.0kb downstream 10.0kb downstream 15827 true Bd2: 34765094-34780920 Brachypodium distachyon
Bradi2g34960 10.0kb downstream 10.0kb downstream 10000 false Bd2: 34765094-34775093 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124568317 5269 Grass View MSA
122042290 5273 Angiosperm View MSA
121346688 5274 Embryophyte View MSA
123428620 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.944        
cufflinks 6.713        
cufflinks 6.694        
cufflinks 5.864        
cufflinks 2.684        
cufflinks 6.262        
cufflinks 5.75        
cufflinks 4.717        
cufflinks 5.515        
cufflinks 3.547        
cufflinks 1.323       Low
cufflinks 5.659        
cufflinks 1.195       Low
cufflinks 0.918       Low
cufflinks 1.848        
cufflinks 6.207        
cufflinks 5.427        
cufflinks 15.134     High High
cufflinks 4.46        
cufflinks 0.693       Low
cufflinks 8.529       High
cufflinks 6.332        
cufflinks 4.492        
cufflinks 4.994        
cufflinks 5.746        
cufflinks 5.935        
cufflinks 1.069       Low
cufflinks 4.842        
cufflinks 4.976        
cufflinks 10.651       High

0 Strain