Gene : Bradi2g34921 B. distachyon v3.1
Defline:  (1 of 2) PTHR12709:SF3 - DNA-DIRECTED RNA POLYMERASE IV SUBUNIT 7-RELATED Genomic Order:  4113
Name:  ? Bradi2g34921 Secondary Identifier:  ? PAC:32778655
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g34921 0.5kb upstream 0.5kb upstream 1211 true Bd2: 34736291-34737501 Brachypodium distachyon
Bradi2g34921 0.5kb upstream 0.5kb upstream 500 false Bd2: 34737002-34737501 Brachypodium distachyon
Bradi2g34921 0.5kb downstream 0.5kb downstream 1211 true Bd2: 34735791-34737001 Brachypodium distachyon
Bradi2g34921 0.5kb downstream 0.5kb downstream 500 false Bd2: 34735791-34736290 Brachypodium distachyon
Bradi2g34921 1.0kb upstream 1.0kb upstream 1711 true Bd2: 34736291-34738001 Brachypodium distachyon
Bradi2g34921 1.0kb upstream 1.0kb upstream 1000 false Bd2: 34737002-34738001 Brachypodium distachyon
Bradi2g34921 1.0kb downstream 1.0kb downstream 1711 true Bd2: 34735291-34737001 Brachypodium distachyon
Bradi2g34921 1.0kb downstream 1.0kb downstream 1000 false Bd2: 34735291-34736290 Brachypodium distachyon
Bradi2g34921 2.0kb upstream 2.0kb upstream 2711 true Bd2: 34736291-34739001 Brachypodium distachyon
Bradi2g34921 2.0kb upstream 2.0kb upstream 2000 false Bd2: 34737002-34739001 Brachypodium distachyon
Bradi2g34921 2.0kb downstream 2.0kb downstream 2711 true Bd2: 34734291-34737001 Brachypodium distachyon
Bradi2g34921 2.0kb downstream 2.0kb downstream 2000 false Bd2: 34734291-34736290 Brachypodium distachyon
Bradi2g34921 5.0kb upstream 5.0kb upstream 5711 true Bd2: 34736291-34742001 Brachypodium distachyon
Bradi2g34921 5.0kb upstream 5.0kb upstream 5000 false Bd2: 34737002-34742001 Brachypodium distachyon
Bradi2g34921 5.0kb downstream 5.0kb downstream 5711 true Bd2: 34731291-34737001 Brachypodium distachyon
Bradi2g34921 5.0kb downstream 5.0kb downstream 5000 false Bd2: 34731291-34736290 Brachypodium distachyon
Bradi2g34921 10.0kb upstream 10.0kb upstream 10711 true Bd2: 34736291-34747001 Brachypodium distachyon
Bradi2g34921 10.0kb upstream 10.0kb upstream 10000 false Bd2: 34737002-34747001 Brachypodium distachyon
Bradi2g34921 10.0kb downstream 10.0kb downstream 10711 true Bd2: 34726291-34737001 Brachypodium distachyon
Bradi2g34921 10.0kb downstream 10.0kb downstream 10000 false Bd2: 34726291-34736290 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124583871 5269 Grass View MSA
122044713 5273 Angiosperm View MSA
121351673 5274 Embryophyte View MSA
123382271 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.455     High Low
cufflinks 22.225     High  
cufflinks 25.145     High  
cufflinks 21.873     High  
cufflinks 17.012     High Low
cufflinks 19.074     High  
cufflinks 23.4     High  
cufflinks 21.135     High  
cufflinks 18.005     High  
cufflinks 26.081     High  
cufflinks 20.621     High  
cufflinks 17.867     High  
cufflinks 14.141     High Low
cufflinks 20.503     High  
cufflinks 14.43     High Low
cufflinks 18.99     High  
cufflinks 30.22     High  
cufflinks 23.955     High  
cufflinks 44.041     High High
cufflinks 22.684     High  
cufflinks 39.391     High High
cufflinks 20.39     High  
cufflinks 18.749     High  
cufflinks 18.754     High  
cufflinks 22.029     High  
cufflinks 27.871     High  
cufflinks 21.88     High  
cufflinks 27.832     High  
cufflinks 25.645     High  
cufflinks 28.661     High  

0 Strain