Gene : Bradi2g35267 B. distachyon v3.1
Defline:  (1 of 57) PF00098 - Zinc knuckle Genomic Order:  4158
Name:  ? Bradi2g35267 Secondary Identifier:  ? PAC:32774036
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g35267 0.5kb upstream 0.5kb upstream 2517 true Bd2: 35255638-35258154 Brachypodium distachyon
Bradi2g35267 0.5kb upstream 0.5kb upstream 500 false Bd2: 35257655-35258154 Brachypodium distachyon
Bradi2g35267 0.5kb downstream 0.5kb downstream 2517 true Bd2: 35255138-35257654 Brachypodium distachyon
Bradi2g35267 0.5kb downstream 0.5kb downstream 500 false Bd2: 35255138-35255637 Brachypodium distachyon
Bradi2g35267 1.0kb upstream 1.0kb upstream 3017 true Bd2: 35255638-35258654 Brachypodium distachyon
Bradi2g35267 1.0kb upstream 1.0kb upstream 1000 false Bd2: 35257655-35258654 Brachypodium distachyon
Bradi2g35267 1.0kb downstream 1.0kb downstream 3017 true Bd2: 35254638-35257654 Brachypodium distachyon
Bradi2g35267 1.0kb downstream 1.0kb downstream 1000 false Bd2: 35254638-35255637 Brachypodium distachyon
Bradi2g35267 2.0kb upstream 2.0kb upstream 4017 true Bd2: 35255638-35259654 Brachypodium distachyon
Bradi2g35267 2.0kb upstream 2.0kb upstream 2000 false Bd2: 35257655-35259654 Brachypodium distachyon
Bradi2g35267 2.0kb downstream 2.0kb downstream 4017 true Bd2: 35253638-35257654 Brachypodium distachyon
Bradi2g35267 2.0kb downstream 2.0kb downstream 2000 false Bd2: 35253638-35255637 Brachypodium distachyon
Bradi2g35267 5.0kb upstream 5.0kb upstream 7017 true Bd2: 35255638-35262654 Brachypodium distachyon
Bradi2g35267 5.0kb upstream 5.0kb upstream 5000 false Bd2: 35257655-35262654 Brachypodium distachyon
Bradi2g35267 5.0kb downstream 5.0kb downstream 7017 true Bd2: 35250638-35257654 Brachypodium distachyon
Bradi2g35267 5.0kb downstream 5.0kb downstream 5000 false Bd2: 35250638-35255637 Brachypodium distachyon
Bradi2g35267 10.0kb upstream 10.0kb upstream 12017 true Bd2: 35255638-35267654 Brachypodium distachyon
Bradi2g35267 10.0kb upstream 10.0kb upstream 10000 false Bd2: 35257655-35267654 Brachypodium distachyon
Bradi2g35267 10.0kb downstream 10.0kb downstream 12017 true Bd2: 35245638-35257654 Brachypodium distachyon
Bradi2g35267 10.0kb downstream 10.0kb downstream 10000 false Bd2: 35245638-35255637 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122006147 5273 Angiosperm View MSA
124590470 5269 Grass View MSA
121276265 5274 Embryophyte View MSA
123314552 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.89        
cufflinks 0.882        
cufflinks 0.711        
cufflinks 0.868        
cufflinks 0.371        
cufflinks 0.346       Low
cufflinks 0.478        
cufflinks 0.495        
cufflinks 0.601        
cufflinks 0.945        
cufflinks 0.556        
cufflinks 0.725        
cufflinks 0.344       Low
cufflinks 0.493        
cufflinks 0.945        
cufflinks 0.255       Low
cufflinks 0.341       Low
cufflinks 0.478        
cufflinks 0.762        
cufflinks 0.207       Low
cufflinks 0.774        
cufflinks 0.856        
cufflinks 0.831        
cufflinks 0.37        
cufflinks 0.624        
cufflinks 0.635        
cufflinks 0.849        
cufflinks 0.891        
cufflinks 0.775        
cufflinks 0.804        

0 Strain