Gene : Bradi2g36130 B. distachyon v3.1
Defline:  (1 of 1) PTHR22939:SF83 - PROTEASE DO-LIKE 2, CHLOROPLASTIC Genomic Order:  4267
Name:  ? Bradi2g36130 Secondary Identifier:  ? PAC:32781110
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g36130 0.5kb upstream 0.5kb upstream 10977 true Bd2: 36254655-36265631 Brachypodium distachyon
Bradi2g36130 0.5kb upstream 0.5kb upstream 500 false Bd2: 36265132-36265631 Brachypodium distachyon
Bradi2g36130 0.5kb downstream 0.5kb downstream 10977 true Bd2: 36254155-36265131 Brachypodium distachyon
Bradi2g36130 0.5kb downstream 0.5kb downstream 500 false Bd2: 36254155-36254654 Brachypodium distachyon
Bradi2g36130 1.0kb upstream 1.0kb upstream 11477 true Bd2: 36254655-36266131 Brachypodium distachyon
Bradi2g36130 1.0kb upstream 1.0kb upstream 1000 false Bd2: 36265132-36266131 Brachypodium distachyon
Bradi2g36130 1.0kb downstream 1.0kb downstream 11477 true Bd2: 36253655-36265131 Brachypodium distachyon
Bradi2g36130 1.0kb downstream 1.0kb downstream 1000 false Bd2: 36253655-36254654 Brachypodium distachyon
Bradi2g36130 2.0kb upstream 2.0kb upstream 12477 true Bd2: 36254655-36267131 Brachypodium distachyon
Bradi2g36130 2.0kb upstream 2.0kb upstream 2000 false Bd2: 36265132-36267131 Brachypodium distachyon
Bradi2g36130 2.0kb downstream 2.0kb downstream 12477 true Bd2: 36252655-36265131 Brachypodium distachyon
Bradi2g36130 2.0kb downstream 2.0kb downstream 2000 false Bd2: 36252655-36254654 Brachypodium distachyon
Bradi2g36130 5.0kb upstream 5.0kb upstream 15477 true Bd2: 36254655-36270131 Brachypodium distachyon
Bradi2g36130 5.0kb upstream 5.0kb upstream 5000 false Bd2: 36265132-36270131 Brachypodium distachyon
Bradi2g36130 5.0kb downstream 5.0kb downstream 15477 true Bd2: 36249655-36265131 Brachypodium distachyon
Bradi2g36130 5.0kb downstream 5.0kb downstream 5000 false Bd2: 36249655-36254654 Brachypodium distachyon
Bradi2g36130 10.0kb upstream 10.0kb upstream 20477 true Bd2: 36254655-36275131 Brachypodium distachyon
Bradi2g36130 10.0kb upstream 10.0kb upstream 10000 false Bd2: 36265132-36275131 Brachypodium distachyon
Bradi2g36130 10.0kb downstream 10.0kb downstream 20477 true Bd2: 36244655-36265131 Brachypodium distachyon
Bradi2g36130 10.0kb downstream 10.0kb downstream 10000 false Bd2: 36244655-36254654 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574247 5269 Grass View MSA
122044524 5273 Angiosperm View MSA
123429293 5275 Viridiplantae View MSA
121310306 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.317     High  
cufflinks 14.992     High High
cufflinks 12.527     High  
cufflinks 12.665     High  
cufflinks 5.472        
cufflinks 11.32     High  
cufflinks 12.069     High  
cufflinks 8.877        
cufflinks 9.117        
cufflinks 9.947        
cufflinks 8.423        
cufflinks 10.397     High  
cufflinks 5.617        
cufflinks 6.173        
cufflinks 8.311        
cufflinks 14.247     High High
cufflinks 9.624        
cufflinks 1.608       Low
cufflinks 6.516        
cufflinks 2.372       Low
cufflinks 4.062        
cufflinks 12.883     High  
cufflinks 7.953        
cufflinks 8.635        
cufflinks 10.722     High  
cufflinks 11.876     High  
cufflinks 3.621       Low
cufflinks 10.61        
cufflinks 11.184     High  
cufflinks 9.549        

0 Strain