Gene : Bradi2g36360 B. distachyon v3.1
Defline:  (1 of 2) K10844 - DNA excision repair protein ERCC-2 (ERCC2, XPD) Genomic Order:  4297
Name:  ? Bradi2g36360 Secondary Identifier:  ? PAC:32780788
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g36360 0.5kb upstream 0.5kb upstream 6518 true Bd2: 36464596-36471113 Brachypodium distachyon
Bradi2g36360 0.5kb upstream 0.5kb upstream 500 false Bd2: 36464596-36465095 Brachypodium distachyon
Bradi2g36360 0.5kb downstream 0.5kb downstream 6518 true Bd2: 36465096-36471613 Brachypodium distachyon
Bradi2g36360 0.5kb downstream 0.5kb downstream 500 false Bd2: 36471114-36471613 Brachypodium distachyon
Bradi2g36360 1.0kb upstream 1.0kb upstream 7018 true Bd2: 36464096-36471113 Brachypodium distachyon
Bradi2g36360 1.0kb upstream 1.0kb upstream 1000 false Bd2: 36464096-36465095 Brachypodium distachyon
Bradi2g36360 1.0kb downstream 1.0kb downstream 7018 true Bd2: 36465096-36472113 Brachypodium distachyon
Bradi2g36360 1.0kb downstream 1.0kb downstream 1000 false Bd2: 36471114-36472113 Brachypodium distachyon
Bradi2g36360 2.0kb upstream 2.0kb upstream 8018 true Bd2: 36463096-36471113 Brachypodium distachyon
Bradi2g36360 2.0kb upstream 2.0kb upstream 2000 false Bd2: 36463096-36465095 Brachypodium distachyon
Bradi2g36360 2.0kb downstream 2.0kb downstream 8018 true Bd2: 36465096-36473113 Brachypodium distachyon
Bradi2g36360 2.0kb downstream 2.0kb downstream 2000 false Bd2: 36471114-36473113 Brachypodium distachyon
Bradi2g36360 5.0kb upstream 5.0kb upstream 11018 true Bd2: 36460096-36471113 Brachypodium distachyon
Bradi2g36360 5.0kb upstream 5.0kb upstream 5000 false Bd2: 36460096-36465095 Brachypodium distachyon
Bradi2g36360 5.0kb downstream 5.0kb downstream 11018 true Bd2: 36465096-36476113 Brachypodium distachyon
Bradi2g36360 5.0kb downstream 5.0kb downstream 5000 false Bd2: 36471114-36476113 Brachypodium distachyon
Bradi2g36360 10.0kb upstream 10.0kb upstream 16018 true Bd2: 36455096-36471113 Brachypodium distachyon
Bradi2g36360 10.0kb upstream 10.0kb upstream 10000 false Bd2: 36455096-36465095 Brachypodium distachyon
Bradi2g36360 10.0kb downstream 10.0kb downstream 16018 true Bd2: 36465096-36481113 Brachypodium distachyon
Bradi2g36360 10.0kb downstream 10.0kb downstream 10000 false Bd2: 36471114-36481113 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576690 5269 Grass View MSA
122046497 5273 Angiosperm View MSA
121344254 5274 Embryophyte View MSA
123426727 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.418        
cufflinks 3.204        
cufflinks 3.566       High
cufflinks 2.507        
cufflinks 1.369       Low
cufflinks 2.531        
cufflinks 2.726        
cufflinks 2.656        
cufflinks 2.864        
cufflinks 1.98        
cufflinks 2.272        
cufflinks 2.336        
cufflinks 1.358       Low
cufflinks 1.58        
cufflinks 1.64        
cufflinks 2.888        
cufflinks 2.518        
cufflinks 4.474       High
cufflinks 2.595        
cufflinks 0.854       Low
cufflinks 2.688        
cufflinks 2.922        
cufflinks 2.644        
cufflinks 2.271        
cufflinks 2.467        
cufflinks 2.545        
cufflinks 1.851        
cufflinks 2.619        
cufflinks 2.344        
cufflinks 2.785        

0 Strain