Gene : Bradi2g36350 B. distachyon v3.1
Defline:  (1 of 1) PTHR12526//PTHR12526:SF362 - GLYCOSYLTRANSFERASE // SUBFAMILY NOT NAMED Genomic Order:  4296
Name:  ? Bradi2g36350 Secondary Identifier:  ? PAC:32779563
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-7238 Brachypodium distachyon pathologic  
Bdistachyon SUCSYN-PWY Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g36350 0.5kb upstream 0.5kb upstream 5038 true Bd2: 36458364-36463401 Brachypodium distachyon
Bradi2g36350 0.5kb upstream 0.5kb upstream 500 false Bd2: 36462902-36463401 Brachypodium distachyon
Bradi2g36350 0.5kb downstream 0.5kb downstream 5038 true Bd2: 36457864-36462901 Brachypodium distachyon
Bradi2g36350 0.5kb downstream 0.5kb downstream 500 false Bd2: 36457864-36458363 Brachypodium distachyon
Bradi2g36350 1.0kb upstream 1.0kb upstream 5538 true Bd2: 36458364-36463901 Brachypodium distachyon
Bradi2g36350 1.0kb upstream 1.0kb upstream 1000 false Bd2: 36462902-36463901 Brachypodium distachyon
Bradi2g36350 1.0kb downstream 1.0kb downstream 5538 true Bd2: 36457364-36462901 Brachypodium distachyon
Bradi2g36350 1.0kb downstream 1.0kb downstream 1000 false Bd2: 36457364-36458363 Brachypodium distachyon
Bradi2g36350 2.0kb upstream 2.0kb upstream 6538 true Bd2: 36458364-36464901 Brachypodium distachyon
Bradi2g36350 2.0kb upstream 2.0kb upstream 2000 false Bd2: 36462902-36464901 Brachypodium distachyon
Bradi2g36350 2.0kb downstream 2.0kb downstream 6538 true Bd2: 36456364-36462901 Brachypodium distachyon
Bradi2g36350 2.0kb downstream 2.0kb downstream 2000 false Bd2: 36456364-36458363 Brachypodium distachyon
Bradi2g36350 5.0kb upstream 5.0kb upstream 9538 true Bd2: 36458364-36467901 Brachypodium distachyon
Bradi2g36350 5.0kb upstream 5.0kb upstream 5000 false Bd2: 36462902-36467901 Brachypodium distachyon
Bradi2g36350 5.0kb downstream 5.0kb downstream 9538 true Bd2: 36453364-36462901 Brachypodium distachyon
Bradi2g36350 5.0kb downstream 5.0kb downstream 5000 false Bd2: 36453364-36458363 Brachypodium distachyon
Bradi2g36350 10.0kb upstream 10.0kb upstream 14538 true Bd2: 36458364-36472901 Brachypodium distachyon
Bradi2g36350 10.0kb upstream 10.0kb upstream 10000 false Bd2: 36462902-36472901 Brachypodium distachyon
Bradi2g36350 10.0kb downstream 10.0kb downstream 14538 true Bd2: 36448364-36462901 Brachypodium distachyon
Bradi2g36350 10.0kb downstream 10.0kb downstream 10000 false Bd2: 36448364-36458363 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578700 5269 Grass View MSA
122041652 5273 Angiosperm View MSA
123428930 5275 Viridiplantae View MSA
121349182 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.382        
cufflinks 0.162        
cufflinks 0.311        
cufflinks 0.159        
cufflinks 0.397        
cufflinks 0.144        
cufflinks 0.184        
cufflinks 0.223        
cufflinks 0.144        
cufflinks 0.464        
cufflinks 0.261        
cufflinks 0.304        
cufflinks 0.07       Low
cufflinks 0.068       Low
cufflinks 0.173        
cufflinks 0.271        
cufflinks 0.207        
cufflinks 0.976       High
cufflinks 0.724       High
cufflinks 1.627       High
cufflinks 0.216        
cufflinks 0.326        
cufflinks 0.164        
cufflinks 0.127        
cufflinks 0.121        
cufflinks 0.525        
cufflinks 0.061     Low Low
cufflinks 0.511        
cufflinks 0.357        
cufflinks 0.328        

0 Strain