Gene : Bradi4g39020 B. distachyon v3.1
Defline:  (1 of 1) 2.5.1.72 - Quinolinate synthase / Quinolinate synthetase Genomic Order:  5025
Name:  ? Bradi4g39020 Secondary Identifier:  ? PAC:32787386
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PYRIDNUCSYN-PWY Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g39020 0.5kb upstream 0.5kb upstream 9828 true Bd4: 43629885-43639712 Brachypodium distachyon
Bradi4g39020 0.5kb upstream 0.5kb upstream 500 false Bd4: 43629885-43630384 Brachypodium distachyon
Bradi4g39020 0.5kb downstream 0.5kb downstream 9828 true Bd4: 43630385-43640212 Brachypodium distachyon
Bradi4g39020 0.5kb downstream 0.5kb downstream 500 false Bd4: 43639713-43640212 Brachypodium distachyon
Bradi4g39020 1.0kb upstream 1.0kb upstream 10328 true Bd4: 43629385-43639712 Brachypodium distachyon
Bradi4g39020 1.0kb upstream 1.0kb upstream 1000 false Bd4: 43629385-43630384 Brachypodium distachyon
Bradi4g39020 1.0kb downstream 1.0kb downstream 10328 true Bd4: 43630385-43640712 Brachypodium distachyon
Bradi4g39020 1.0kb downstream 1.0kb downstream 1000 false Bd4: 43639713-43640712 Brachypodium distachyon
Bradi4g39020 2.0kb upstream 2.0kb upstream 11328 true Bd4: 43628385-43639712 Brachypodium distachyon
Bradi4g39020 2.0kb upstream 2.0kb upstream 2000 false Bd4: 43628385-43630384 Brachypodium distachyon
Bradi4g39020 2.0kb downstream 2.0kb downstream 11328 true Bd4: 43630385-43641712 Brachypodium distachyon
Bradi4g39020 2.0kb downstream 2.0kb downstream 2000 false Bd4: 43639713-43641712 Brachypodium distachyon
Bradi4g39020 5.0kb upstream 5.0kb upstream 14328 true Bd4: 43625385-43639712 Brachypodium distachyon
Bradi4g39020 5.0kb upstream 5.0kb upstream 5000 false Bd4: 43625385-43630384 Brachypodium distachyon
Bradi4g39020 5.0kb downstream 5.0kb downstream 14328 true Bd4: 43630385-43644712 Brachypodium distachyon
Bradi4g39020 5.0kb downstream 5.0kb downstream 5000 false Bd4: 43639713-43644712 Brachypodium distachyon
Bradi4g39020 10.0kb upstream 10.0kb upstream 19328 true Bd4: 43620385-43639712 Brachypodium distachyon
Bradi4g39020 10.0kb upstream 10.0kb upstream 10000 false Bd4: 43620385-43630384 Brachypodium distachyon
Bradi4g39020 10.0kb downstream 10.0kb downstream 19328 true Bd4: 43630385-43649712 Brachypodium distachyon
Bradi4g39020 10.0kb downstream 10.0kb downstream 10000 false Bd4: 43639713-43649712 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124584011 5269 Grass View MSA
122044938 5273 Angiosperm View MSA
121346502 5274 Embryophyte View MSA
123424432 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.708       High
cufflinks 0.295        
cufflinks 0.228        
cufflinks 0.231        
cufflinks 0.261        
cufflinks 0.277        
cufflinks 0.253        
cufflinks 0.386        
cufflinks 0.301        
cufflinks 0.314        
cufflinks 0.495       High
cufflinks 0.4        
cufflinks 0.361        
cufflinks 0.518       High
cufflinks 0.538       High
cufflinks 0.392        
cufflinks 0.25        
cufflinks 0.381        
cufflinks 0.443        
cufflinks 0.329        
cufflinks 0.229        
cufflinks 0.468        
cufflinks 0.43        
cufflinks 0.318        
cufflinks 0.267        
cufflinks 0.205       Low
cufflinks 0.4        
cufflinks 0.234        
cufflinks 0.335        
cufflinks 0.267        

0 Strain