Gene : Bradi2g39610 B. distachyon v3.1
Defline:  (1 of 2) K02151 - V-type H+-transporting ATPase subunit F (ATPeV1F, ATP6S14) Genomic Order:  4746
Name:  ? Bradi2g39610 Secondary Identifier:  ? PAC:32773945
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-7219 Brachypodium distachyon pathologic  
Bdistachyon PWY-7229 Brachypodium distachyon pathologic  
Bdistachyon PWY-841 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g39610 0.5kb upstream 0.5kb upstream 2968 true Bd2: 39521488-39524455 Brachypodium distachyon
Bradi2g39610 0.5kb upstream 0.5kb upstream 500 false Bd2: 39523956-39524455 Brachypodium distachyon
Bradi2g39610 0.5kb downstream 0.5kb downstream 2968 true Bd2: 39520988-39523955 Brachypodium distachyon
Bradi2g39610 0.5kb downstream 0.5kb downstream 500 false Bd2: 39520988-39521487 Brachypodium distachyon
Bradi2g39610 1.0kb upstream 1.0kb upstream 3468 true Bd2: 39521488-39524955 Brachypodium distachyon
Bradi2g39610 1.0kb upstream 1.0kb upstream 1000 false Bd2: 39523956-39524955 Brachypodium distachyon
Bradi2g39610 1.0kb downstream 1.0kb downstream 3468 true Bd2: 39520488-39523955 Brachypodium distachyon
Bradi2g39610 1.0kb downstream 1.0kb downstream 1000 false Bd2: 39520488-39521487 Brachypodium distachyon
Bradi2g39610 2.0kb upstream 2.0kb upstream 4468 true Bd2: 39521488-39525955 Brachypodium distachyon
Bradi2g39610 2.0kb upstream 2.0kb upstream 2000 false Bd2: 39523956-39525955 Brachypodium distachyon
Bradi2g39610 2.0kb downstream 2.0kb downstream 4468 true Bd2: 39519488-39523955 Brachypodium distachyon
Bradi2g39610 2.0kb downstream 2.0kb downstream 2000 false Bd2: 39519488-39521487 Brachypodium distachyon
Bradi2g39610 5.0kb upstream 5.0kb upstream 7468 true Bd2: 39521488-39528955 Brachypodium distachyon
Bradi2g39610 5.0kb upstream 5.0kb upstream 5000 false Bd2: 39523956-39528955 Brachypodium distachyon
Bradi2g39610 5.0kb downstream 5.0kb downstream 7468 true Bd2: 39516488-39523955 Brachypodium distachyon
Bradi2g39610 5.0kb downstream 5.0kb downstream 5000 false Bd2: 39516488-39521487 Brachypodium distachyon
Bradi2g39610 10.0kb upstream 10.0kb upstream 12468 true Bd2: 39521488-39533955 Brachypodium distachyon
Bradi2g39610 10.0kb upstream 10.0kb upstream 10000 false Bd2: 39523956-39533955 Brachypodium distachyon
Bradi2g39610 10.0kb downstream 10.0kb downstream 12468 true Bd2: 39511488-39523955 Brachypodium distachyon
Bradi2g39610 10.0kb downstream 10.0kb downstream 10000 false Bd2: 39511488-39521487 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124583710 5269 Grass View MSA
122044374 5273 Angiosperm View MSA
121344263 5274 Embryophyte View MSA
123428206 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.637        
cufflinks 5.563        
cufflinks 5.945        
cufflinks 8.607        
cufflinks 7.521        
cufflinks 4.849        
cufflinks 4.893        
cufflinks 3.999       Low
cufflinks 4.915        
cufflinks 7.974        
cufflinks 4.88        
cufflinks 4.167       Low
cufflinks 3.254       Low
cufflinks 5.262        
cufflinks 6.418        
cufflinks 4.03       Low
cufflinks 10.523       High
cufflinks 7.859        
cufflinks 8.124        
cufflinks 10.677       High
cufflinks 14.303     High High
cufflinks 4.588       Low
cufflinks 4.615       Low
cufflinks 5.284        
cufflinks 6.493        
cufflinks 8.725        
cufflinks 5.222        
cufflinks 7.811        
cufflinks 6.25        
cufflinks 10.197       High

0 Strain