Gene : Bradi2g39810 B. distachyon v3.1
Defline:  (1 of 1) K03249 - translation initiation factor 3 subunit F (EIF3F) Genomic Order:  4769
Name:  ? Bradi2g39810 Secondary Identifier:  ? PAC:32770910
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g39810 0.5kb upstream 0.5kb upstream 3514 true Bd2: 39630364-39633877 Brachypodium distachyon
Bradi2g39810 0.5kb upstream 0.5kb upstream 500 false Bd2: 39630364-39630863 Brachypodium distachyon
Bradi2g39810 0.5kb downstream 0.5kb downstream 3514 true Bd2: 39630864-39634377 Brachypodium distachyon
Bradi2g39810 0.5kb downstream 0.5kb downstream 500 false Bd2: 39633878-39634377 Brachypodium distachyon
Bradi2g39810 1.0kb upstream 1.0kb upstream 4014 true Bd2: 39629864-39633877 Brachypodium distachyon
Bradi2g39810 1.0kb upstream 1.0kb upstream 1000 false Bd2: 39629864-39630863 Brachypodium distachyon
Bradi2g39810 1.0kb downstream 1.0kb downstream 4014 true Bd2: 39630864-39634877 Brachypodium distachyon
Bradi2g39810 1.0kb downstream 1.0kb downstream 1000 false Bd2: 39633878-39634877 Brachypodium distachyon
Bradi2g39810 2.0kb upstream 2.0kb upstream 5014 true Bd2: 39628864-39633877 Brachypodium distachyon
Bradi2g39810 2.0kb upstream 2.0kb upstream 2000 false Bd2: 39628864-39630863 Brachypodium distachyon
Bradi2g39810 2.0kb downstream 2.0kb downstream 5014 true Bd2: 39630864-39635877 Brachypodium distachyon
Bradi2g39810 2.0kb downstream 2.0kb downstream 2000 false Bd2: 39633878-39635877 Brachypodium distachyon
Bradi2g39810 5.0kb upstream 5.0kb upstream 8014 true Bd2: 39625864-39633877 Brachypodium distachyon
Bradi2g39810 5.0kb upstream 5.0kb upstream 5000 false Bd2: 39625864-39630863 Brachypodium distachyon
Bradi2g39810 5.0kb downstream 5.0kb downstream 8014 true Bd2: 39630864-39638877 Brachypodium distachyon
Bradi2g39810 5.0kb downstream 5.0kb downstream 5000 false Bd2: 39633878-39638877 Brachypodium distachyon
Bradi2g39810 10.0kb upstream 10.0kb upstream 13014 true Bd2: 39620864-39633877 Brachypodium distachyon
Bradi2g39810 10.0kb upstream 10.0kb upstream 10000 false Bd2: 39620864-39630863 Brachypodium distachyon
Bradi2g39810 10.0kb downstream 10.0kb downstream 13014 true Bd2: 39630864-39643877 Brachypodium distachyon
Bradi2g39810 10.0kb downstream 10.0kb downstream 10000 false Bd2: 39633878-39643877 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124583646 5269 Grass View MSA
122044125 5273 Angiosperm View MSA
121349154 5274 Embryophyte View MSA
123428358 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.062     High  
cufflinks 22.872     High  
cufflinks 20.987     High  
cufflinks 24.508     High  
cufflinks 17.413     High  
cufflinks 20.086     High  
cufflinks 22.146     High  
cufflinks 18.157     High  
cufflinks 19.415     High  
cufflinks 21.751     High  
cufflinks 8.776     High Low
cufflinks 15.595     High  
cufflinks 6.596       Low
cufflinks 8.749     High Low
cufflinks 14.065     High  
cufflinks 22.124     High  
cufflinks 27.395     High  
cufflinks 39.675     High High
cufflinks 28.845     High  
cufflinks 13.692     High  
cufflinks 30.266     High High
cufflinks 16.721     High  
cufflinks 17.125     High  
cufflinks 18.895     High  
cufflinks 23.978     High  
cufflinks 18.975     High  
cufflinks 9.028     High Low
cufflinks 19.63     High  
cufflinks 18.093     High  
cufflinks 26.411     High  

0 Strain