Gene : Bradi2g39950 B. distachyon v3.1
Defline:  (1 of 1) PTHR11071//PTHR11071:SF11 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE // PEPTIDYL-PROLYL CIS-TRANS ISOMERASE C Genomic Order:  4786
Name:  ? Bradi2g39950 Secondary Identifier:  ? PAC:32773643
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g39950 0.5kb upstream 0.5kb upstream 3423 true Bd2: 39687772-39691194 Brachypodium distachyon
Bradi2g39950 0.5kb upstream 0.5kb upstream 500 false Bd2: 39690695-39691194 Brachypodium distachyon
Bradi2g39950 0.5kb downstream 0.5kb downstream 3423 true Bd2: 39687272-39690694 Brachypodium distachyon
Bradi2g39950 0.5kb downstream 0.5kb downstream 500 false Bd2: 39687272-39687771 Brachypodium distachyon
Bradi2g39950 1.0kb upstream 1.0kb upstream 3923 true Bd2: 39687772-39691694 Brachypodium distachyon
Bradi2g39950 1.0kb upstream 1.0kb upstream 1000 false Bd2: 39690695-39691694 Brachypodium distachyon
Bradi2g39950 1.0kb downstream 1.0kb downstream 3923 true Bd2: 39686772-39690694 Brachypodium distachyon
Bradi2g39950 1.0kb downstream 1.0kb downstream 1000 false Bd2: 39686772-39687771 Brachypodium distachyon
Bradi2g39950 2.0kb upstream 2.0kb upstream 4923 true Bd2: 39687772-39692694 Brachypodium distachyon
Bradi2g39950 2.0kb upstream 2.0kb upstream 2000 false Bd2: 39690695-39692694 Brachypodium distachyon
Bradi2g39950 2.0kb downstream 2.0kb downstream 4923 true Bd2: 39685772-39690694 Brachypodium distachyon
Bradi2g39950 2.0kb downstream 2.0kb downstream 2000 false Bd2: 39685772-39687771 Brachypodium distachyon
Bradi2g39950 5.0kb upstream 5.0kb upstream 7923 true Bd2: 39687772-39695694 Brachypodium distachyon
Bradi2g39950 5.0kb upstream 5.0kb upstream 5000 false Bd2: 39690695-39695694 Brachypodium distachyon
Bradi2g39950 5.0kb downstream 5.0kb downstream 7923 true Bd2: 39682772-39690694 Brachypodium distachyon
Bradi2g39950 5.0kb downstream 5.0kb downstream 5000 false Bd2: 39682772-39687771 Brachypodium distachyon
Bradi2g39950 10.0kb upstream 10.0kb upstream 12923 true Bd2: 39687772-39700694 Brachypodium distachyon
Bradi2g39950 10.0kb upstream 10.0kb upstream 10000 false Bd2: 39690695-39700694 Brachypodium distachyon
Bradi2g39950 10.0kb downstream 10.0kb downstream 12923 true Bd2: 39677772-39690694 Brachypodium distachyon
Bradi2g39950 10.0kb downstream 10.0kb downstream 10000 false Bd2: 39677772-39687771 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569768 5269 Grass View MSA
122048638 5273 Angiosperm View MSA
123428973 5275 Viridiplantae View MSA
121349242 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 129.919     High  
cufflinks 165.427     High High
cufflinks 139.877     High  
cufflinks 174.148     High High
cufflinks 112.188     High  
cufflinks 118.765     High  
cufflinks 160.332     High High
cufflinks 90.815     High  
cufflinks 88.752     High  
cufflinks 128.246     High  
cufflinks 63.278     High  
cufflinks 92.25     High  
cufflinks 64.044     High  
cufflinks 69.951     High  
cufflinks 103.72     High  
cufflinks 133.419     High  
cufflinks 144.369     High  
cufflinks 37.695     High Low
cufflinks 114.075     High  
cufflinks 43.18     High Low
cufflinks 74.29     High  
cufflinks 105.436     High  
cufflinks 83.587     High  
cufflinks 96.514     High  
cufflinks 133.348     High  
cufflinks 147.738     High  
cufflinks 37.202     High Low
cufflinks 142.307     High  
cufflinks 124.783     High  
cufflinks 116.397     High  

0 Strain