Gene : Bradi2g40441 B. distachyon v3.1
Defline:  (1 of 1) PTHR12741//PTHR12741:SF11 - LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 Genomic Order:  4821
Name:  ? Bradi2g40441 Secondary Identifier:  ? PAC:32779087
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-6773 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g40441 0.5kb upstream 0.5kb upstream 20697 true Bd2: 40314501-40335197 Brachypodium distachyon
Bradi2g40441 0.5kb upstream 0.5kb upstream 500 false Bd2: 40334698-40335197 Brachypodium distachyon
Bradi2g40441 0.5kb downstream 0.5kb downstream 20697 true Bd2: 40314001-40334697 Brachypodium distachyon
Bradi2g40441 0.5kb downstream 0.5kb downstream 500 false Bd2: 40314001-40314500 Brachypodium distachyon
Bradi2g40441 1.0kb upstream 1.0kb upstream 21197 true Bd2: 40314501-40335697 Brachypodium distachyon
Bradi2g40441 1.0kb upstream 1.0kb upstream 1000 false Bd2: 40334698-40335697 Brachypodium distachyon
Bradi2g40441 1.0kb downstream 1.0kb downstream 21197 true Bd2: 40313501-40334697 Brachypodium distachyon
Bradi2g40441 1.0kb downstream 1.0kb downstream 1000 false Bd2: 40313501-40314500 Brachypodium distachyon
Bradi2g40441 2.0kb upstream 2.0kb upstream 22197 true Bd2: 40314501-40336697 Brachypodium distachyon
Bradi2g40441 2.0kb upstream 2.0kb upstream 2000 false Bd2: 40334698-40336697 Brachypodium distachyon
Bradi2g40441 2.0kb downstream 2.0kb downstream 22197 true Bd2: 40312501-40334697 Brachypodium distachyon
Bradi2g40441 2.0kb downstream 2.0kb downstream 2000 false Bd2: 40312501-40314500 Brachypodium distachyon
Bradi2g40441 5.0kb upstream 5.0kb upstream 25197 true Bd2: 40314501-40339697 Brachypodium distachyon
Bradi2g40441 5.0kb upstream 5.0kb upstream 5000 false Bd2: 40334698-40339697 Brachypodium distachyon
Bradi2g40441 5.0kb downstream 5.0kb downstream 25197 true Bd2: 40309501-40334697 Brachypodium distachyon
Bradi2g40441 5.0kb downstream 5.0kb downstream 5000 false Bd2: 40309501-40314500 Brachypodium distachyon
Bradi2g40441 10.0kb upstream 10.0kb upstream 30197 true Bd2: 40314501-40344697 Brachypodium distachyon
Bradi2g40441 10.0kb upstream 10.0kb upstream 10000 false Bd2: 40334698-40344697 Brachypodium distachyon
Bradi2g40441 10.0kb downstream 10.0kb downstream 30197 true Bd2: 40304501-40334697 Brachypodium distachyon
Bradi2g40441 10.0kb downstream 10.0kb downstream 10000 false Bd2: 40304501-40314500 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124581568 5269 Grass View MSA
122042706 5273 Angiosperm View MSA
121310004 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.735        
cufflinks 1.826        
cufflinks 2.454       High
cufflinks 1.409        
cufflinks 0.332       Low
cufflinks 0.974        
cufflinks 1.059        
cufflinks 0.978        
cufflinks 1.063        
cufflinks 0.891        
cufflinks 0.601        
cufflinks 1.097        
cufflinks 0.538        
cufflinks 0.304       Low
cufflinks 0.727        
cufflinks 1.46        
cufflinks 0.411        
cufflinks 4.754       High
cufflinks 0.611        
cufflinks 0.115     Low Low
cufflinks 1.289        
cufflinks 2.185       High
cufflinks 1.072        
cufflinks 0.742        
cufflinks 0.835        
cufflinks 1.865        
cufflinks 0.236       Low
cufflinks 1.914        
cufflinks 1.857        
cufflinks 1.915        

0 Strain