Gene : Bradi2g40480 B. distachyon v3.1
Defline:  (1 of 1) PTHR12555//PTHR12555:SF14 - UBIQUITIN FUSION DEGRADATON PROTEIN 1 Genomic Order:  4828
Name:  ? Bradi2g40480 Secondary Identifier:  ? PAC:32771776
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g40480 0.5kb upstream 0.5kb upstream 4190 true Bd2: 40383105-40387294 Brachypodium distachyon
Bradi2g40480 0.5kb upstream 0.5kb upstream 500 false Bd2: 40383105-40383604 Brachypodium distachyon
Bradi2g40480 0.5kb downstream 0.5kb downstream 4190 true Bd2: 40383605-40387794 Brachypodium distachyon
Bradi2g40480 0.5kb downstream 0.5kb downstream 500 false Bd2: 40387295-40387794 Brachypodium distachyon
Bradi2g40480 1.0kb upstream 1.0kb upstream 4690 true Bd2: 40382605-40387294 Brachypodium distachyon
Bradi2g40480 1.0kb upstream 1.0kb upstream 1000 false Bd2: 40382605-40383604 Brachypodium distachyon
Bradi2g40480 1.0kb downstream 1.0kb downstream 4690 true Bd2: 40383605-40388294 Brachypodium distachyon
Bradi2g40480 1.0kb downstream 1.0kb downstream 1000 false Bd2: 40387295-40388294 Brachypodium distachyon
Bradi2g40480 2.0kb upstream 2.0kb upstream 5690 true Bd2: 40381605-40387294 Brachypodium distachyon
Bradi2g40480 2.0kb upstream 2.0kb upstream 2000 false Bd2: 40381605-40383604 Brachypodium distachyon
Bradi2g40480 2.0kb downstream 2.0kb downstream 5690 true Bd2: 40383605-40389294 Brachypodium distachyon
Bradi2g40480 2.0kb downstream 2.0kb downstream 2000 false Bd2: 40387295-40389294 Brachypodium distachyon
Bradi2g40480 5.0kb upstream 5.0kb upstream 8690 true Bd2: 40378605-40387294 Brachypodium distachyon
Bradi2g40480 5.0kb upstream 5.0kb upstream 5000 false Bd2: 40378605-40383604 Brachypodium distachyon
Bradi2g40480 5.0kb downstream 5.0kb downstream 8690 true Bd2: 40383605-40392294 Brachypodium distachyon
Bradi2g40480 5.0kb downstream 5.0kb downstream 5000 false Bd2: 40387295-40392294 Brachypodium distachyon
Bradi2g40480 10.0kb upstream 10.0kb upstream 13690 true Bd2: 40373605-40387294 Brachypodium distachyon
Bradi2g40480 10.0kb upstream 10.0kb upstream 10000 false Bd2: 40373605-40383604 Brachypodium distachyon
Bradi2g40480 10.0kb downstream 10.0kb downstream 13690 true Bd2: 40383605-40397294 Brachypodium distachyon
Bradi2g40480 10.0kb downstream 10.0kb downstream 10000 false Bd2: 40387295-40397294 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576515 5269 Grass View MSA
122046586 5273 Angiosperm View MSA
121347183 5274 Embryophyte View MSA
123428055 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.376        
cufflinks 3.233       Low
cufflinks 4.035        
cufflinks 3.516        
cufflinks 10.28     High High
cufflinks 3.274       Low
cufflinks 2.867       Low
cufflinks 6.231        
cufflinks 3.409        
cufflinks 4.4        
cufflinks 8.528       High
cufflinks 13.985     High High
cufflinks 4.176        
cufflinks 4.118        
cufflinks 8.093       High
cufflinks 3.573        
cufflinks 4.037        
cufflinks 4.648        
cufflinks 8.069       High
cufflinks 14.357     High High
cufflinks 4.907        
cufflinks 5.057        
cufflinks 5.359        
cufflinks 3.515        
cufflinks 3.05       Low
cufflinks 4.363        
cufflinks 3.816        
cufflinks 4.598        
cufflinks 4.858        
cufflinks 6.262        

0 Strain