Gene : Bradi2g40507 B. distachyon v3.1
Defline:  (1 of 2) 2.1.1.33 - tRNA (guanine(46)-N(7))-methyltransferase / tRNA guanine 7-methyltransferase Genomic Order:  4833
Name:  ? Bradi2g40507 Secondary Identifier:  ? PAC:32771317
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g40507 0.5kb upstream 0.5kb upstream 3270 true Bd2: 40433476-40436745 Brachypodium distachyon
Bradi2g40507 0.5kb upstream 0.5kb upstream 500 false Bd2: 40436246-40436745 Brachypodium distachyon
Bradi2g40507 0.5kb downstream 0.5kb downstream 3270 true Bd2: 40432976-40436245 Brachypodium distachyon
Bradi2g40507 0.5kb downstream 0.5kb downstream 500 false Bd2: 40432976-40433475 Brachypodium distachyon
Bradi2g40507 1.0kb upstream 1.0kb upstream 3770 true Bd2: 40433476-40437245 Brachypodium distachyon
Bradi2g40507 1.0kb upstream 1.0kb upstream 1000 false Bd2: 40436246-40437245 Brachypodium distachyon
Bradi2g40507 1.0kb downstream 1.0kb downstream 3770 true Bd2: 40432476-40436245 Brachypodium distachyon
Bradi2g40507 1.0kb downstream 1.0kb downstream 1000 false Bd2: 40432476-40433475 Brachypodium distachyon
Bradi2g40507 2.0kb upstream 2.0kb upstream 4770 true Bd2: 40433476-40438245 Brachypodium distachyon
Bradi2g40507 2.0kb upstream 2.0kb upstream 2000 false Bd2: 40436246-40438245 Brachypodium distachyon
Bradi2g40507 2.0kb downstream 2.0kb downstream 4770 true Bd2: 40431476-40436245 Brachypodium distachyon
Bradi2g40507 2.0kb downstream 2.0kb downstream 2000 false Bd2: 40431476-40433475 Brachypodium distachyon
Bradi2g40507 5.0kb upstream 5.0kb upstream 7770 true Bd2: 40433476-40441245 Brachypodium distachyon
Bradi2g40507 5.0kb upstream 5.0kb upstream 5000 false Bd2: 40436246-40441245 Brachypodium distachyon
Bradi2g40507 5.0kb downstream 5.0kb downstream 7770 true Bd2: 40428476-40436245 Brachypodium distachyon
Bradi2g40507 5.0kb downstream 5.0kb downstream 5000 false Bd2: 40428476-40433475 Brachypodium distachyon
Bradi2g40507 10.0kb upstream 10.0kb upstream 12770 true Bd2: 40433476-40446245 Brachypodium distachyon
Bradi2g40507 10.0kb upstream 10.0kb upstream 10000 false Bd2: 40436246-40446245 Brachypodium distachyon
Bradi2g40507 10.0kb downstream 10.0kb downstream 12770 true Bd2: 40423476-40436245 Brachypodium distachyon
Bradi2g40507 10.0kb downstream 10.0kb downstream 10000 false Bd2: 40423476-40433475 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573695 5269 Grass View MSA
122047983 5273 Angiosperm View MSA
121345324 5274 Embryophyte View MSA
123425871 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.21        
cufflinks 7.66       High
cufflinks 6.322        
cufflinks 8.864       High
cufflinks 3.218        
cufflinks 5.579        
cufflinks 6.774        
cufflinks 4.708        
cufflinks 4.615        
cufflinks 8.137       High
cufflinks 3.122        
cufflinks 4.078        
cufflinks 2.13       Low
cufflinks 3.17        
cufflinks 3.726        
cufflinks 5.552        
cufflinks 6.081        
cufflinks 2.389       Low
cufflinks 4.332        
cufflinks 1.495       Low
cufflinks 4.685        
cufflinks 5.628        
cufflinks 4.428        
cufflinks 4.666        
cufflinks 6.522        
cufflinks 7.231        
cufflinks 2.002       Low
cufflinks 6.646        
cufflinks 6.832        
cufflinks 6.714        

0 Strain